Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC073387.2-201ENST00000604797 784 ntBASIC5.45□□□□□ -1.54
USP29Q9HBJ7 AC025175.1-201ENST00000606482 759 ntBASIC5.45□□□□□ -1.54
USP29Q9HBJ7 AC004948.1-201ENST00000609858 672 ntBASIC5.45□□□□□ -1.54
USP29Q9HBJ7 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.45□□□□□ -1.54
USP29Q9HBJ7 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
USP29Q9HBJ7 AC022079.2-201ENST00000619739 566 ntBASIC5.45□□□□□ -1.54
USP29Q9HBJ7 AC022079.1-201ENST00000621546 602 ntBASIC5.45□□□□□ -1.54
USP29Q9HBJ7 AC004232.3-201ENST00000622977 525 ntBASIC5.45□□□□□ -1.54
USP29Q9HBJ7 AC120349.3-201ENST00000624377 529 ntBASIC5.45□□□□□ -1.54
USP29Q9HBJ7 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.45□□□□□ -1.54
USP29Q9HBJ7 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
USP29Q9HBJ7 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
USP29Q9HBJ7 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
USP29Q9HBJ7 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
USP29Q9HBJ7 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.45□□□□□ -1.54
USP29Q9HBJ7 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.45□□□□□ -1.54
USP29Q9HBJ7 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.45□□□□□ -1.54
USP29Q9HBJ7 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.45□□□□□ -1.54
USP29Q9HBJ7 AC007342.7-201ENST00000624610 2337 ntBASIC5.45□□□□□ -1.54
USP29Q9HBJ7 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 RNU5B-1-201ENST00000363286 116 ntBASIC5.44□□□□□ -1.54
USP29Q9HBJ7 RNA5SP335-201ENST00000363817 110 ntBASIC5.44□□□□□ -1.54
USP29Q9HBJ7 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 TAS2R15P-201ENST00000390674 928 ntBASIC5.44□□□□□ -1.54
USP29Q9HBJ7 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 AL034403.1-201ENST00000399414 885 ntBASIC5.44□□□□□ -1.54
USP29Q9HBJ7 CHMP1B2P-201ENST00000399581 597 ntBASIC5.44□□□□□ -1.54
USP29Q9HBJ7 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 EIF4A1P1-201ENST00000420241 934 ntBASIC5.44□□□□□ -1.54
USP29Q9HBJ7 AC005005.2-201ENST00000420779 380 ntBASIC5.44□□□□□ -1.54
USP29Q9HBJ7 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 AC005189.1-201ENST00000431286 310 ntBASIC5.44□□□□□ -1.54
USP29Q9HBJ7 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 CYCSP6-201ENST00000434498 302 ntBASIC5.44□□□□□ -1.54
USP29Q9HBJ7 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 Z73417.1-201ENST00000447373 778 ntBASIC5.44□□□□□ -1.54
USP29Q9HBJ7 AL096803.2-201ENST00000450032 677 ntBASIC5.44□□□□□ -1.54
USP29Q9HBJ7 Z95152.1-201ENST00000453556 656 ntBASIC5.44□□□□□ -1.54
USP29Q9HBJ7 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 AC093752.1-206ENST00000511823 336 ntBASIC5.44□□□□□ -1.54
USP29Q9HBJ7 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 AC087888.1-201ENST00000550884 1254 ntBASIC5.44□□□□□ -1.54
USP29Q9HBJ7 AL049830.4-201ENST00000555149 351 ntBASIC5.44□□□□□ -1.54
USP29Q9HBJ7 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 AL132657.2-201ENST00000564417 358 ntBASIC5.44□□□□□ -1.54
USP29Q9HBJ7 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 AC012254.4-201ENST00000588843 273 ntBASIC5.44□□□□□ -1.54
USP29Q9HBJ7 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 AC019131.2-201ENST00000609071 870 ntBASIC5.44□□□□□ -1.54
USP29Q9HBJ7 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 AL139407.1-201ENST00000613826 1175 ntBASIC5.44□□□□□ -1.54
USP29Q9HBJ7 AC011330.2-201ENST00000621680 635 ntBASIC5.44□□□□□ -1.54
USP29Q9HBJ7 AC015660.5-201ENST00000623238 564 ntBASIC5.44□□□□□ -1.54
USP29Q9HBJ7 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 AL355578.1-201ENST00000607405 1328 ntBASIC5.44□□□□□ -1.54
USP29Q9HBJ7 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
USP29Q9HBJ7 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 AC026523.2-201ENST00000625039 7739 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 RNU1-146P-201ENST00000364015 165 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 RNU6-1263P-201ENST00000384601 106 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 RNU6-906P-201ENST00000384700 70 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 AL603865.2-201ENST00000401679 213 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 CTSL3P-202ENST00000412179 788 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 AC010385.1-201ENST00000412374 256 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms