Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC093909.5-201ENST00000621839 1799 ntBASIC5.6□□□□□ -1.51
UPF2Q9HAU5 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
UPF2Q9HAU5 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
UPF2Q9HAU5 AC135352.1-201ENST00000506173 1418 ntBASIC5.59□□□□□ -1.51
UPF2Q9HAU5 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
UPF2Q9HAU5 AC067945.1-201ENST00000342609 618 ntBASIC5.59□□□□□ -1.51
UPF2Q9HAU5 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.59□□□□□ -1.51
UPF2Q9HAU5 AC007068.1-201ENST00000396690 844 ntBASIC5.59□□□□□ -1.51
UPF2Q9HAU5 AL078604.1-201ENST00000404609 466 ntBASIC5.59□□□□□ -1.51
UPF2Q9HAU5 AP000534.2-201ENST00000412729 568 ntBASIC5.59□□□□□ -1.51
UPF2Q9HAU5 MTND4LP21-201ENST00000415303 295 ntBASIC5.59□□□□□ -1.51
UPF2Q9HAU5 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.59□□□□□ -1.51
UPF2Q9HAU5 SKP1P3-201ENST00000429280 487 ntBASIC5.59□□□□□ -1.51
UPF2Q9HAU5 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.59□□□□□ -1.51
UPF2Q9HAU5 AL450263.2-201ENST00000439400 589 ntBASIC5.59□□□□□ -1.51
UPF2Q9HAU5 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.59□□□□□ -1.51
UPF2Q9HAU5 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.59□□□□□ -1.51
UPF2Q9HAU5 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.59□□□□□ -1.51
UPF2Q9HAU5 AL589765.3-201ENST00000446084 462 ntBASIC5.59□□□□□ -1.51
UPF2Q9HAU5 AURKAPS1-201ENST00000451805 1212 ntBASIC5.59□□□□□ -1.51
UPF2Q9HAU5 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.59□□□□□ -1.51
UPF2Q9HAU5 AC092905.1-201ENST00000467527 949 ntBASIC5.59□□□□□ -1.51
UPF2Q9HAU5 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.59□□□□□ -1.51
UPF2Q9HAU5 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.59□□□□□ -1.51
UPF2Q9HAU5 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.59□□□□□ -1.51
UPF2Q9HAU5 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.59□□□□□ -1.51
UPF2Q9HAU5 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.59□□□□□ -1.51
UPF2Q9HAU5 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.59□□□□□ -1.51
UPF2Q9HAU5 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.59□□□□□ -1.51
UPF2Q9HAU5 AC103792.1-201ENST00000603591 919 ntBASIC5.59□□□□□ -1.51
UPF2Q9HAU5 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.59□□□□□ -1.51
UPF2Q9HAU5 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.59□□□□□ -1.51
UPF2Q9HAU5 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
UPF2Q9HAU5 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
UPF2Q9HAU5 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
UPF2Q9HAU5 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.59□□□□□ -1.52
UPF2Q9HAU5 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
UPF2Q9HAU5 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 DDX18P6-201ENST00000450119 1997 ntBASIC5.58□□□□□ -1.52
UPF2Q9HAU5 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 MTCO1P22-201ENST00000604619 1360 ntBASIC5.58□□□□□ -1.52
UPF2Q9HAU5 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 RNU4-23P-201ENST00000362839 140 ntBASIC5.58□□□□□ -1.52
UPF2Q9HAU5 RNA5SP435-201ENST00000364044 108 ntBASIC5.58□□□□□ -1.52
UPF2Q9HAU5 SNORA74A-201ENST00000364089 198 ntBASIC5.58□□□□□ -1.52
UPF2Q9HAU5 RNU1-63P-201ENST00000383902 164 ntBASIC5.58□□□□□ -1.52
UPF2Q9HAU5 RN7SKP206-201ENST00000410823 293 ntBASIC5.58□□□□□ -1.52
UPF2Q9HAU5 GSTM3P2-201ENST00000412746 530 ntBASIC5.58□□□□□ -1.52
UPF2Q9HAU5 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 ISCUP1-201ENST00000454451 448 ntBASIC5.58□□□□□ -1.52
UPF2Q9HAU5 AURKAPS2-201ENST00000454983 333 ntBASIC5.58□□□□□ -1.52
UPF2Q9HAU5 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 AC006967.1-201ENST00000467608 589 ntBASIC5.58□□□□□ -1.52
UPF2Q9HAU5 RN7SL30P-201ENST00000488416 306 ntBASIC5.58□□□□□ -1.52
UPF2Q9HAU5 AGGF1P3-201ENST00000493675 1213 ntBASIC5.58□□□□□ -1.52
UPF2Q9HAU5 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 AC015795.1-201ENST00000513669 327 ntBASIC5.58□□□□□ -1.52
UPF2Q9HAU5 ATP5LP3-201ENST00000514223 304 ntBASIC5.58□□□□□ -1.52
UPF2Q9HAU5 RN7SKP66-201ENST00000516681 231 ntBASIC5.58□□□□□ -1.52
UPF2Q9HAU5 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 MYL12AP1-201ENST00000518490 515 ntBASIC5.58□□□□□ -1.52
UPF2Q9HAU5 IGLV3-26-201ENST00000520756 302 ntBASIC5.58□□□□□ -1.52
UPF2Q9HAU5 AP000859.1-201ENST00000525536 307 ntBASIC5.58□□□□□ -1.52
UPF2Q9HAU5 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 OR10G5P-201ENST00000532733 358 ntBASIC5.58□□□□□ -1.52
UPF2Q9HAU5 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 CR382285.2-201ENST00000624662 1495 ntBASIC5.58□□□□□ -1.52
UPF2Q9HAU5 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
UPF2Q9HAU5 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
UPF2Q9HAU5 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
UPF2Q9HAU5 NXPH1-205ENST00000602349 1953 ntBASIC5.57□□□□□ -1.52
UPF2Q9HAU5 AC015813.6-201ENST00000624409 5808 ntBASIC5.57□□□□□ -1.52
UPF2Q9HAU5 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.57□□□□□ -1.52
UPF2Q9HAU5 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
UPF2Q9HAU5 RN7SKP269-201ENST00000365545 319 ntBASIC5.57□□□□□ -1.52
UPF2Q9HAU5 RNA5SP151-201ENST00000365632 117 ntBASIC5.57□□□□□ -1.52
UPF2Q9HAU5 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
UPF2Q9HAU5 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
UPF2Q9HAU5 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.57□□□□□ -1.52
UPF2Q9HAU5 VN1R8P-201ENST00000407739 893 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms