Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 RNA5SP372-201ENST00000390836 115 ntBASIC4.77□□□□□ -1.65
C9orf72Q96LT7 HDGFP1-201ENST00000405943 252 ntBASIC4.77□□□□□ -1.65
C9orf72Q96LT7 RNA5SP113-201ENST00000410486 84 ntBASIC4.77□□□□□ -1.65
C9orf72Q96LT7 VN1R31P-201ENST00000417498 730 ntBASIC4.77□□□□□ -1.65
C9orf72Q96LT7 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 AC234781.3-201ENST00000452540 973 ntBASIC4.77□□□□□ -1.65
C9orf72Q96LT7 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 AC091868.1-201ENST00000508746 304 ntBASIC4.77□□□□□ -1.65
C9orf72Q96LT7 RN7SKP34-201ENST00000516142 244 ntBASIC4.77□□□□□ -1.65
C9orf72Q96LT7 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 AC091042.1-201ENST00000579213 173 ntBASIC4.77□□□□□ -1.65
C9orf72Q96LT7 MIR4270-201ENST00000581799 70 ntBASIC4.77□□□□□ -1.65
C9orf72Q96LT7 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 AC020910.3-201ENST00000603701 874 ntBASIC4.77□□□□□ -1.65
C9orf72Q96LT7 AL161616.1-201ENST00000611867 286 ntBASIC4.77□□□□□ -1.65
C9orf72Q96LT7 AC022960.2-201ENST00000616300 666 ntBASIC4.77□□□□□ -1.65
C9orf72Q96LT7 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 SAMMSON-226ENST00000642089 1582 ntBASIC4.77□□□□□ -1.65
C9orf72Q96LT7 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 AL031119.1-201ENST00000404707 1879 ntBASIC4.77□□□□□ -1.65
C9orf72Q96LT7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
C9orf72Q96LT7 MAPK10-263ENST00000641052 4307 ntBASIC4.76□□□□□ -1.65
C9orf72Q96LT7 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 CEACAMP8-201ENST00000413902 580 ntBASIC4.76□□□□□ -1.65
C9orf72Q96LT7 Z95327.2-201ENST00000414579 1873 ntBASIC4.76□□□□□ -1.65
C9orf72Q96LT7 RPL26P29-201ENST00000415623 438 ntBASIC4.76□□□□□ -1.65
C9orf72Q96LT7 AL590139.1-201ENST00000416267 400 ntBASIC4.76□□□□□ -1.65
C9orf72Q96LT7 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 AC106901.1-201ENST00000425086 698 ntBASIC4.76□□□□□ -1.65
C9orf72Q96LT7 RPL21P43-201ENST00000425440 472 ntBASIC4.76□□□□□ -1.65
C9orf72Q96LT7 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 CEACAMP9-201ENST00000442990 513 ntBASIC4.76□□□□□ -1.65
C9orf72Q96LT7 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 SLC25A18P1-201ENST00000449385 454 ntBASIC4.76□□□□□ -1.65
C9orf72Q96LT7 AC079168.2-201ENST00000453977 416 ntBASIC4.76□□□□□ -1.65
C9orf72Q96LT7 AL356390.1-201ENST00000455684 397 ntBASIC4.76□□□□□ -1.65
C9orf72Q96LT7 NIP7P2-201ENST00000485801 544 ntBASIC4.76□□□□□ -1.65
C9orf72Q96LT7 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 RNA5SP446-201ENST00000515955 82 ntBASIC4.76□□□□□ -1.65
C9orf72Q96LT7 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 AP001804.2-201ENST00000533932 910 ntBASIC4.76□□□□□ -1.65
C9orf72Q96LT7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 AC027455.1-201ENST00000574104 594 ntBASIC4.76□□□□□ -1.65
C9orf72Q96LT7 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 SLC25A36P1-201ENST00000590111 465 ntBASIC4.76□□□□□ -1.65
C9orf72Q96LT7 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 AL137072.1-201ENST00000603444 466 ntBASIC4.76□□□□□ -1.65
C9orf72Q96LT7 AL391358.1-201ENST00000605342 190 ntBASIC4.76□□□□□ -1.65
C9orf72Q96LT7 AL008729.2-201ENST00000606393 473 ntBASIC4.76□□□□□ -1.65
C9orf72Q96LT7 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 OR51C1P-202ENST00000641159 1444 ntBASIC4.76□□□□□ -1.65
C9orf72Q96LT7 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 AC120338.1-201ENST00000625074 1541 ntBASIC4.76□□□□□ -1.65
C9orf72Q96LT7 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
C9orf72Q96LT7 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
C9orf72Q96LT7 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
C9orf72Q96LT7 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
C9orf72Q96LT7 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
C9orf72Q96LT7 SNORA56-201ENST00000383966 129 ntBASIC4.75□□□□□ -1.65
C9orf72Q96LT7 RNU6-1320P-201ENST00000390838 107 ntBASIC4.75□□□□□ -1.65
C9orf72Q96LT7 RNU6-1269P-201ENST00000391139 107 ntBASIC4.75□□□□□ -1.65
C9orf72Q96LT7 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
C9orf72Q96LT7 OR51B3P-201ENST00000412287 913 ntBASIC4.75□□□□□ -1.65
C9orf72Q96LT7 AC098592.2-201ENST00000413158 265 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms