Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RN7SL466P-201ENST00000497546 295 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AC110760.3-201ENST00000598794 467 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AL589674.2-201ENST00000604304 337 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AC121247.2-201ENST00000604776 136 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AL691477.1-201ENST00000624398 162 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AC068620.4-201ENST00000636730 1182 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 U6.107-201ENST00000637108 79 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AL049767.1-202ENST00000637826 242 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AC073869.8-201ENST00000641806 335 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 MTCO1P6-201ENST00000481192 1384 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AP000473.2-201ENST00000602659 1537 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 SNORA51.1-201ENST00000363243 140 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 RNU6-1339P-201ENST00000363574 91 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 Y_RNA.465-201ENST00000384293 102 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 SNORD116-1-201ENST00000384335 95 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 SNORA40.2-201ENST00000390847 128 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 MIR1302-8-201ENST00000408342 128 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 RNU2-22P-201ENST00000411266 212 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 AL513325.1-201ENST00000417716 1034 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 AL390119.1-201ENST00000440329 312 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 FGF7P5-201ENST00000441829 291 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 RHEBP2-201ENST00000450289 600 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 AL133477.1-201ENST00000457472 514 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 RNU7-27P-201ENST00000459281 62 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 NBEAP1-201ENST00000554452 979 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 AC087465.1-201ENST00000560574 245 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 MTCYBP33-201ENST00000575007 1130 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 AC090525.3-201ENST00000605601 189 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 AP003392.5-201ENST00000607857 415 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 AC109309.2-201ENST00000612597 332 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 AC007786.3-201ENST00000615154 596 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 AL158163.2-201ENST00000619110 700 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 uc_338.7-201ENST00000621834 124 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 AC087821.2-201ENST00000637086 450 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms