Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC008814.1-201ENST00000603797 406 ntBASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 MIR6778-201ENST00000617912 73 ntBASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 OR5H2-201ENST00000355273 945 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 RNA5SP335-201ENST00000363817 110 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 RNA5SP27-201ENST00000363839 119 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 RNU1-146P-201ENST00000364015 165 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 RNA5SP510-201ENST00000364697 99 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 RNA5SP223-201ENST00000365174 120 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 RPL23AP59-201ENST00000399415 461 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 BTF3P8-201ENST00000414577 526 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 AL356320.2-201ENST00000417263 507 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 REREP1Y-201ENST00000422655 198 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 MTND6P12-201ENST00000428247 522 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 AC012075.1-201ENST00000436549 580 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 REREP2Y-201ENST00000439103 200 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 YWHAZP2-201ENST00000440317 728 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 AL050341.1-201ENST00000447743 313 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 AC239798.3-201ENST00000454459 408 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 AC079168.1-201ENST00000458741 345 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 AC084754.1-201ENST00000463466 464 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 RPL35AP19-201ENST00000469425 329 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 AC098583.1-201ENST00000480875 255 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 RN7SL273P-201ENST00000481561 299 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 RNA5SP373-201ENST00000517271 95 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 HIGD1AP18-201ENST00000520730 278 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 AC112191.2-201ENST00000522428 333 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 AL442163.2-201ENST00000553912 710 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 AC023813.2-201ENST00000564321 469 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 AL353778.1-201ENST00000603149 408 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 AC009597.2-201ENST00000604659 592 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 AC096586.1-201ENST00000610267 561 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 FRG1HP-204ENST00000617940 757 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 AC011815.3-201ENST00000624194 473 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 AC139792.2-201ENST00000624218 587 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 AC006210.2-201ENST00000367074 1545 ntBASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
ATG4AQ8WYN0 AC125336.1-201ENST00000508893 2827 ntBASIC5.42□□□□□ -1.54
ATG4AQ8WYN0 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ATG4AQ8WYN0 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
ATG4AQ8WYN0 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.42□□□□□ -1.54
ATG4AQ8WYN0 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ATG4AQ8WYN0 AC017079.1-201ENST00000333650 415 ntBASIC5.42□□□□□ -1.54
ATG4AQ8WYN0 AC005294.1-201ENST00000355509 281 ntBASIC5.42□□□□□ -1.54
ATG4AQ8WYN0 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
ATG4AQ8WYN0 RNU6-1214P-201ENST00000363650 109 ntBASIC5.42□□□□□ -1.54
ATG4AQ8WYN0 MIR105-1-201ENST00000385222 81 ntBASIC5.42□□□□□ -1.54
ATG4AQ8WYN0 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.42□□□□□ -1.54
ATG4AQ8WYN0 AC009518.2-201ENST00000418056 731 ntBASIC5.42□□□□□ -1.54
ATG4AQ8WYN0 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms