Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 GLUD1P9-201ENST00000420997 1173 ntBASIC3.83□□□□□ -1.8
CCDC168Q8NDH2 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC168Q8NDH2 AL136231.1-201ENST00000429407 730 ntBASIC3.83□□□□□ -1.8
CCDC168Q8NDH2 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC168Q8NDH2 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC168Q8NDH2 IMPA1P1-201ENST00000510718 842 ntBASIC3.83□□□□□ -1.8
CCDC168Q8NDH2 OR7E10P-201ENST00000526420 991 ntBASIC3.83□□□□□ -1.8
CCDC168Q8NDH2 NDUFB4P11-201ENST00000560510 395 ntBASIC3.83□□□□□ -1.8
CCDC168Q8NDH2 OR7A19P-201ENST00000608051 733 ntBASIC3.83□□□□□ -1.8
CCDC168Q8NDH2 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
CCDC168Q8NDH2 AL357559.1-201ENST00000622228 274 ntBASIC3.83□□□□□ -1.8
CCDC168Q8NDH2 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC168Q8NDH2 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC168Q8NDH2 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
CCDC168Q8NDH2 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
CCDC168Q8NDH2 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC168Q8NDH2 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC168Q8NDH2 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
CCDC168Q8NDH2 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 MIR7-3-201ENST00000384898 110 ntBASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 AC140479.3-201ENST00000418944 1126 ntBASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 AC114814.2-201ENST00000419195 485 ntBASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 AC017019.1-201ENST00000426129 261 ntBASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 IGBP1P4-201ENST00000503202 879 ntBASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 PAICSP4-201ENST00000517543 1253 ntBASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 AP001357.1-201ENST00000586304 1053 ntBASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 AC112230.1-201ENST00000604342 547 ntBASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 BNIP3P35-201ENST00000604530 490 ntBASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 AL451086.1-201ENST00000605596 223 ntBASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 AP000756.2-201ENST00000624168 2567 ntBASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 AC112198.2-201ENST00000426589 6996 ntBASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 MARK2P15-201ENST00000432204 2186 ntBASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 RPL21P17-201ENST00000397467 475 ntBASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 NDUFB4P4-201ENST00000404822 243 ntBASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 RPL23AP38-201ENST00000423801 469 ntBASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 AL451139.1-201ENST00000434718 346 ntBASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 RNA5SP49-201ENST00000516450 115 ntBASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 AC069542.2-201ENST00000624816 216 ntBASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC168Q8NDH2 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC168Q8NDH2 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC168Q8NDH2 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC168Q8NDH2 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC168Q8NDH2 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC168Q8NDH2 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC168Q8NDH2 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC168Q8NDH2 QRSL1P2-201ENST00000418582 964 ntBASIC3.81□□□□□ -1.8
CCDC168Q8NDH2 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC168Q8NDH2 AC079804.1-201ENST00000461922 436 ntBASIC3.81□□□□□ -1.8
CCDC168Q8NDH2 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC168Q8NDH2 Y_RNA.673-201ENST00000516306 88 ntBASIC3.81□□□□□ -1.8
CCDC168Q8NDH2 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC168Q8NDH2 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.81□□□□□ -1.8
CCDC168Q8NDH2 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC168Q8NDH2 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CCDC168Q8NDH2 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC168Q8NDH2 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC168Q8NDH2 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms