Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RNU6-709P-201ENST00000517257 104 ntBASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 CYCSP28-201ENST00000534284 321 ntBASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 NANOGNBP2-201ENST00000544753 553 ntBASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 AC084373.1-201ENST00000603311 235 ntBASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 AC011815.3-201ENST00000624194 473 ntBASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 PANDAR-201ENST00000629595 1506 ntBASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 AL136164.3-201ENST00000624429 3978 ntBASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 ZNF733P-202ENST00000444809 1573 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 AC012020.1-201ENST00000624541 1728 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 EOGT-210ENST00000615922 1931 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 SNORA27.3-201ENST00000364937 134 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 MIR195-201ENST00000385194 87 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 AL589655.1-201ENST00000405398 482 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 AL034374.1-201ENST00000406329 351 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 DDX39BP1-205ENST00000422507 192 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 GTF2IP2-201ENST00000424290 697 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 DPY19L1P2-201ENST00000426647 915 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 AC115283.1-201ENST00000427353 400 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 CACYBPP1-201ENST00000438592 684 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 IGHV5-78-201ENST00000450948 295 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 YWHAEP1-201ENST00000453697 763 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 AC007998.1-201ENST00000474156 672 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 RN7SL547P-201ENST00000490793 290 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 DEFB109F-201ENST00000491870 277 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 PRELID3BP7-201ENST00000503606 469 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 STMN1P2-201ENST00000508435 439 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 AC021146.7-201ENST00000509604 775 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 SNORD46.2-201ENST00000516021 102 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 RNU6-760P-201ENST00000516078 97 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 IGHV3-63-201ENST00000518422 341 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 AC026688.1-201ENST00000520639 1168 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 MIMT1-201ENST00000597105 1050 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 AC005377.1-201ENST00000605126 456 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 OR6R2P-201ENST00000609216 300 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 AC008758.3-201ENST00000507003 1829 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 AC092079.1-201ENST00000558620 1985 ntBASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC71LQ8N9Z2 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AC009804.1-201ENST00000400949 179 ntBASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 MIR921-201ENST00000401133 56 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms