Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 AC069304.3-201ENST00000603938 1084 ntBASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 VN1R74P-201ENST00000613259 503 ntBASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 MTCO1P7-201ENST00000419523 1542 ntBASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 NSRP1P1-201ENST00000444067 1693 ntBASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 AP001284.1-201ENST00000528393 2118 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 RNU6-1214P-201ENST00000363650 109 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 RN7SKP6-201ENST00000364795 319 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 SNORA11B-201ENST00000408175 129 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 TAF13P2-201ENST00000416876 286 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 C1DP1-201ENST00000426049 402 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 YWHAEP5-201ENST00000431545 765 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 FTH1P16-201ENST00000435241 552 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 CACYBPP1-201ENST00000438592 684 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 SPRYD7P1-201ENST00000443861 570 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 AC100832.1-201ENST00000471945 383 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 UBA52P7-201ENST00000486088 380 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 AC027308.1-201ENST00000517993 110 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 NRBF2P4-201ENST00000520874 850 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 AC124293.1-201ENST00000530034 493 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 AC135279.1-201ENST00000543493 504 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 MTCYBP27-201ENST00000555160 670 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 AC019322.1-201ENST00000571869 389 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 AC021749.1-201ENST00000604322 607 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 AC064807.4-201ENST00000607201 407 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 BX323046.1-201ENST00000610145 535 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 AC084782.3-201ENST00000612282 578 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 AC005840.5-201ENST00000619166 599 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 VN1R7P-201ENST00000619242 903 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 AC145207.9-201ENST00000623802 325 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 AC017037.3-201ENST00000625016 472 ntBASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
PTCHD3Q3KNS1 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTCHD3Q3KNS1 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
PTCHD3Q3KNS1 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
PTCHD3Q3KNS1 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTCHD3Q3KNS1 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.34□□□□□ -1.55
PTCHD3Q3KNS1 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTCHD3Q3KNS1 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.34□□□□□ -1.55
PTCHD3Q3KNS1 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTCHD3Q3KNS1 MTND4P10-201ENST00000446199 1363 ntBASIC5.34□□□□□ -1.55
PTCHD3Q3KNS1 LINC01963-201ENST00000562038 3148 ntBASIC5.34□□□□□ -1.55
PTCHD3Q3KNS1 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
PTCHD3Q3KNS1 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms