Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RNA5SP154-201ENST00000516193 111 ntBASIC4.34□□□□□ -1.71
RFX4Q33E94 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RFX4Q33E94 AC092490.3-201ENST00000545370 572 ntBASIC4.34□□□□□ -1.71
RFX4Q33E94 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RFX4Q33E94 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.34□□□□□ -1.71
RFX4Q33E94 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RFX4Q33E94 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.34□□□□□ -1.71
RFX4Q33E94 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.34□□□□□ -1.71
RFX4Q33E94 AC093249.4-201ENST00000564755 259 ntBASIC4.34□□□□□ -1.71
RFX4Q33E94 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.34□□□□□ -1.71
RFX4Q33E94 MIR4489-201ENST00000578869 62 ntBASIC4.34□□□□□ -1.71
RFX4Q33E94 MIR1269B-201ENST00000580405 75 ntBASIC4.34□□□□□ -1.71
RFX4Q33E94 MIR4691-201ENST00000583764 85 ntBASIC4.34□□□□□ -1.71
RFX4Q33E94 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.34□□□□□ -1.71
RFX4Q33E94 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.34□□□□□ -1.71
RFX4Q33E94 MEMO1P5-201ENST00000604810 406 ntBASIC4.34□□□□□ -1.71
RFX4Q33E94 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.34□□□□□ -1.71
RFX4Q33E94 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.34□□□□□ -1.71
RFX4Q33E94 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RFX4Q33E94 CR381572.2-201ENST00000624852 397 ntBASIC4.34□□□□□ -1.71
RFX4Q33E94 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
RFX4Q33E94 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RFX4Q33E94 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.34□□□□□ -1.71
RFX4Q33E94 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
RFX4Q33E94 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RFX4Q33E94 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.34□□□□□ -1.71
RFX4Q33E94 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RFX4Q33E94 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
RFX4Q33E94 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RFX4Q33E94 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RFX4Q33E94 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RFX4Q33E94 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.33□□□□□ -1.72
RFX4Q33E94 KPNA2P2-201ENST00000419546 1489 ntBASIC4.33□□□□□ -1.72
RFX4Q33E94 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.33□□□□□ -1.72
RFX4Q33E94 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.33□□□□□ -1.72
RFX4Q33E94 ATP5F1P2-201ENST00000398143 760 ntBASIC4.33□□□□□ -1.72
RFX4Q33E94 CENPIP1-201ENST00000425713 902 ntBASIC4.33□□□□□ -1.72
RFX4Q33E94 RPL23AP25-201ENST00000430973 463 ntBASIC4.33□□□□□ -1.72
RFX4Q33E94 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.33□□□□□ -1.72
RFX4Q33E94 RPL23AP56-201ENST00000460778 453 ntBASIC4.33□□□□□ -1.72
RFX4Q33E94 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.33□□□□□ -1.72
RFX4Q33E94 AC090114.3-201ENST00000479267 829 ntBASIC4.33□□□□□ -1.72
RFX4Q33E94 RN7SL809P-201ENST00000482040 297 ntBASIC4.33□□□□□ -1.72
RFX4Q33E94 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.33□□□□□ -1.72
RFX4Q33E94 MRPS33P2-201ENST00000507850 322 ntBASIC4.33□□□□□ -1.72
RFX4Q33E94 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.33□□□□□ -1.72
RFX4Q33E94 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RFX4Q33E94 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.33□□□□□ -1.72
RFX4Q33E94 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.33□□□□□ -1.72
RFX4Q33E94 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.33□□□□□ -1.72
RFX4Q33E94 AC022832.1-201ENST00000530718 645 ntBASIC4.33□□□□□ -1.72
RFX4Q33E94 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.33□□□□□ -1.72
RFX4Q33E94 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.33□□□□□ -1.72
RFX4Q33E94 SUMO2P15-201ENST00000604285 278 ntBASIC4.33□□□□□ -1.72
RFX4Q33E94 AC138473.1-201ENST00000605717 526 ntBASIC4.33□□□□□ -1.72
RFX4Q33E94 AP001521.2-201ENST00000608772 546 ntBASIC4.33□□□□□ -1.72
RFX4Q33E94 AC093799.2-201ENST00000610062 578 ntBASIC4.33□□□□□ -1.72
RFX4Q33E94 AC007497.1-201ENST00000610421 561 ntBASIC4.33□□□□□ -1.72
RFX4Q33E94 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.33□□□□□ -1.72
RFX4Q33E94 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
RFX4Q33E94 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RFX4Q33E94 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
RFX4Q33E94 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RFX4Q33E94 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RFX4Q33E94 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RFX4Q33E94 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFX4Q33E94 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFX4Q33E94 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
RFX4Q33E94 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.32□□□□□ -1.72
RFX4Q33E94 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.32□□□□□ -1.72
RFX4Q33E94 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFX4Q33E94 OR10J6P-201ENST00000289731 930 ntBASIC4.32□□□□□ -1.72
RFX4Q33E94 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFX4Q33E94 RNA5SP52-201ENST00000362448 134 ntBASIC4.32□□□□□ -1.72
RFX4Q33E94 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
RFX4Q33E94 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.32□□□□□ -1.72
RFX4Q33E94 RNU6-171P-201ENST00000384354 107 ntBASIC4.32□□□□□ -1.72
RFX4Q33E94 AL589647.1-201ENST00000402485 466 ntBASIC4.32□□□□□ -1.72
RFX4Q33E94 GTF2IP5-201ENST00000414608 731 ntBASIC4.32□□□□□ -1.72
RFX4Q33E94 GJA6P-201ENST00000415117 1042 ntBASIC4.32□□□□□ -1.72
RFX4Q33E94 RPL12P43-201ENST00000420608 499 ntBASIC4.32□□□□□ -1.72
RFX4Q33E94 GLUD1P9-201ENST00000420997 1173 ntBASIC4.32□□□□□ -1.72
RFX4Q33E94 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.32□□□□□ -1.72
RFX4Q33E94 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.32□□□□□ -1.72
RFX4Q33E94 RAB9AP5-201ENST00000437794 597 ntBASIC4.32□□□□□ -1.72
RFX4Q33E94 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.32□□□□□ -1.72
RFX4Q33E94 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.32□□□□□ -1.72
RFX4Q33E94 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.32□□□□□ -1.72
RFX4Q33E94 RAB9AP2-201ENST00000443911 597 ntBASIC4.32□□□□□ -1.72
RFX4Q33E94 RPS27AP15-201ENST00000447672 466 ntBASIC4.32□□□□□ -1.72
RFX4Q33E94 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.32□□□□□ -1.72
RFX4Q33E94 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.32□□□□□ -1.72
RFX4Q33E94 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.32□□□□□ -1.72
RFX4Q33E94 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.32□□□□□ -1.72
RFX4Q33E94 AC090013.1-201ENST00000485147 480 ntBASIC4.32□□□□□ -1.72
RFX4Q33E94 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.32□□□□□ -1.72
RFX4Q33E94 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.32□□□□□ -1.72
RFX4Q33E94 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.32□□□□□ -1.72
RFX4Q33E94 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.32□□□□□ -1.72
RFX4Q33E94 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms