Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC008627.1-201ENST00000517511 1704 ntBASIC5.31□□□□□ -1.56
NKX6-1P78426 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.31□□□□□ -1.56
NKX6-1P78426 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.31□□□□□ -1.56
NKX6-1P78426 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
NKX6-1P78426 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
NKX6-1P78426 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.31□□□□□ -1.56
NKX6-1P78426 AC134882.1-201ENST00000603738 1676 ntBASIC5.31□□□□□ -1.56
NKX6-1P78426 AP001541.1-201ENST00000623322 1904 ntBASIC5.31□□□□□ -1.56
NKX6-1P78426 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
NKX6-1P78426 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NKX6-1P78426 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NKX6-1P78426 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NKX6-1P78426 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NKX6-1P78426 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NKX6-1P78426 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NKX6-1P78426 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
NKX6-1P78426 AC109315.1-201ENST00000584143 1347 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 AP005432.1-201ENST00000580891 3485 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.3□□□□□ -1.56
NKX6-1P78426 AL034546.1-201ENST00000623740 3693 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.3□□□□□ -1.56
NKX6-1P78426 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NKX6-1P78426 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
NKX6-1P78426 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NKX6-1P78426 RN7SKP292-201ENST00000365522 317 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NKX6-1P78426 MIR143-201ENST00000385300 106 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.3□□□□□ -1.56
NKX6-1P78426 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.3□□□□□ -1.56
NKX6-1P78426 RNA5SP156-201ENST00000410250 110 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.3□□□□□ -1.56
NKX6-1P78426 AL161449.1-201ENST00000414531 1199 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.3□□□□□ -1.56
NKX6-1P78426 AC019050.1-201ENST00000418508 492 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.3□□□□□ -1.56
NKX6-1P78426 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.3□□□□□ -1.56
NKX6-1P78426 AC004074.1-201ENST00000421810 1063 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.3□□□□□ -1.56
NKX6-1P78426 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.3□□□□□ -1.56
NKX6-1P78426 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
NKX6-1P78426 RPS26P40-201ENST00000435209 294 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.3□□□□□ -1.56
NKX6-1P78426 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.3□□□□□ -1.56
NKX6-1P78426 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.3□□□□□ -1.56
NKX6-1P78426 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.3□□□□□ -1.56
NKX6-1P78426 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.3□□□□□ -1.56
NKX6-1P78426 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.3□□□□□ -1.56
NKX6-1P78426 RPL7P59-201ENST00000447700 943 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 MTND1P29-201ENST00000448112 647 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 COX6CP18-201ENST00000448769 222 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 BZW1P2-201ENST00000473537 826 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NKX6-1P78426 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NKX6-1P78426 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.3□□□□□ -1.56
NKX6-1P78426 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.3□□□□□ -1.56
NKX6-1P78426 XKRY-201ENST00000510392 1100 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 OR5BM1P-201ENST00000512021 366 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.3□□□□□ -1.56
NKX6-1P78426 ATP5LP3-201ENST00000514223 304 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 AC097486.1-201ENST00000515331 210 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 RNU6-232P-201ENST00000517144 64 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 AC008429.4-201ENST00000521201 182 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.3□□□□□ -1.56
NKX6-1P78426 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.3□□□□□ -1.56
NKX6-1P78426 UBE2NP1-201ENST00000545592 458 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.3□□□□□ -1.56
NKX6-1P78426 AC116553.2-201ENST00000564203 463 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 MIR3176-201ENST00000582210 90 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 MIR4999-201ENST00000585029 91 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
NKX6-1P78426 PSMA6P4-201ENST00000603247 718 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 AC009027.1-201ENST00000604510 479 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 AC131235.4-201ENST00000609288 620 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.3□□□□□ -1.56
NKX6-1P78426 AL354976.1-201ENST00000613843 387 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 AC069234.4-201ENST00000621276 412 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 AC116618.1-201ENST00000634617 774 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 AC022325.1-201ENST00000502748 2199 ntBASIC5.3□□□□□ -1.56
NKX6-1P78426 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NKX6-1P78426 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.3□□□□□ -1.56
NKX6-1P78426 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.3□□□□□ -1.56
NKX6-1P78426 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NKX6-1P78426 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.3□□□□□ -1.56
NKX6-1P78426 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
NKX6-1P78426 HDAC1P2-201ENST00000453661 1398 ntBASIC5.29□□□□□ -1.56
NKX6-1P78426 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.29□□□□□ -1.56
NKX6-1P78426 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NKX6-1P78426 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
NKX6-1P78426 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.29□□□□□ -1.56
NKX6-1P78426 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NKX6-1P78426 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.29□□□□□ -1.56
NKX6-1P78426 CASC19-204ENST00000641001 2055 ntBASIC5.29□□□□□ -1.56
NKX6-1P78426 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NKX6-1P78426 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NKX6-1P78426 AL133264.1-201ENST00000407157 562 ntBASIC5.29□□□□□ -1.56
NKX6-1P78426 MIR1178-201ENST00000408396 91 ntBASIC5.29□□□□□ -1.56
NKX6-1P78426 RNU2-42P-201ENST00000410697 113 ntBASIC5.29□□□□□ -1.56
NKX6-1P78426 RN7SKP182-201ENST00000410772 298 ntBASIC5.29□□□□□ -1.56
NKX6-1P78426 RN7SKP293-201ENST00000411389 296 ntBASIC5.29□□□□□ -1.56
NKX6-1P78426 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms