Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 RN7SL290P-201ENST00000578661 300 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC079315.1-201ENST00000602952 623 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AP001823.1-201ENST00000604056 1003 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AP003392.5-201ENST00000607857 415 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AL159169.2-201ENST00000610061 1269 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 HULC.1-201ENST00000612720 240 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AL121890.3-201ENST00000618494 516 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 MIR6861-201ENST00000618657 64 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 SNORA11.6-201ENST00000619030 128 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC068792.1-201ENST00000621354 417 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC091932.2-201ENST00000623014 291 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC015871.5-202ENST00000623252 701 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC025262.3-201ENST00000623666 360 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AL049536.1-201ENST00000625043 744 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 EIF3EP1-201ENST00000433978 1316 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC117409.1-201ENST00000470499 1310 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 NEPNP-201ENST00000404786 1371 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 CASC19-204ENST00000641001 2055 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
ERVFC1-1P60608 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
ERVFC1-1P60608 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
ERVFC1-1P60608 OR51H2P-202ENST00000641424 3046 ntBASIC4.34□□□□□ -1.72
ERVFC1-1P60608 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
ERVFC1-1P60608 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
ERVFC1-1P60608 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
ERVFC1-1P60608 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
ERVFC1-1P60608 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 AC126323.6-202ENST00000568092 3511 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 AL672167.1-204ENST00000641875 3017 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 BX005019.1-201ENST00000561881 1810 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 KARSP1-201ENST00000451871 1752 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 ELL2P3-201ENST00000457883 1602 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 BTF3P8-201ENST00000414577 526 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 RPL35AP31-201ENST00000418340 337 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 AC011233.1-201ENST00000422812 283 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 VN1R20P-201ENST00000425215 966 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 AC092393.1-201ENST00000439625 742 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 UBE2D3P4-201ENST00000441973 436 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 CXCR2P1-202ENST00000443392 1074 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 AL157827.1-201ENST00000447622 132 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 AC092685.1-201ENST00000447960 1243 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 RBMY2TP-201ENST00000451162 947 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 RPS27AP8-201ENST00000452665 445 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 OR2AF1P-201ENST00000454899 889 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 RPL5P13-201ENST00000462840 709 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 MTND4LP3-201ENST00000468320 276 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 RPL23AP44-201ENST00000482216 473 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 RPL34P33-201ENST00000486062 334 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 AP002453.1-201ENST00000492327 668 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 AC025459.1-201ENST00000504072 156 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 AC111000.2-201ENST00000507775 550 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 HMGN1P16-201ENST00000508308 283 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 RNA5SP360-201ENST00000516555 118 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 SNORA31.13-201ENST00000516624 135 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 AC013701.1-201ENST00000522657 465 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.33□□□□□ -1.72
ERVFC1-1P60608 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.33□□□□□ -1.72
ERVFC1-1P60608 AC084121.1-201ENST00000533882 835 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms