Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SUMO3P55854 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SUMO3P55854 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SUMO3P55854 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SUMO3P55854 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SUMO3P55854 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SUMO3P55854 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.22□□□□□ -1.57
SUMO3P55854 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SUMO3P55854 OR52B3P-201ENST00000314715 928 ntBASIC5.22□□□□□ -1.57
SUMO3P55854 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.22□□□□□ -1.57
SUMO3P55854 AC245060.4-201ENST00000413293 1121 ntBASIC5.22□□□□□ -1.57
SUMO3P55854 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.22□□□□□ -1.57
SUMO3P55854 RNF10P1-201ENST00000418589 369 ntBASIC5.22□□□□□ -1.57
SUMO3P55854 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.22□□□□□ -1.57
SUMO3P55854 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.22□□□□□ -1.57
SUMO3P55854 AL139421.1-201ENST00000423010 169 ntBASIC5.22□□□□□ -1.57
SUMO3P55854 BX323845.3-201ENST00000428215 527 ntBASIC5.22□□□□□ -1.57
SUMO3P55854 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.22□□□□□ -1.57
SUMO3P55854 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.22□□□□□ -1.57
SUMO3P55854 MTND3P1-201ENST00000441336 220 ntBASIC5.22□□□□□ -1.57
SUMO3P55854 REG1CP-206ENST00000447469 496 ntBASIC5.22□□□□□ -1.57
SUMO3P55854 RPL7P59-201ENST00000447700 943 ntBASIC5.22□□□□□ -1.57
SUMO3P55854 AL034418.1-201ENST00000448675 860 ntBASIC5.22□□□□□ -1.57
SUMO3P55854 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.22□□□□□ -1.57
SUMO3P55854 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.22□□□□□ -1.57
SUMO3P55854 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.22□□□□□ -1.57
SUMO3P55854 RPL7AP10-201ENST00000481016 791 ntBASIC5.22□□□□□ -1.57
SUMO3P55854 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SUMO3P55854 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SUMO3P55854 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SUMO3P55854 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.22□□□□□ -1.57
SUMO3P55854 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.22□□□□□ -1.57
SUMO3P55854 AC104090.1-201ENST00000506341 1171 ntBASIC5.22□□□□□ -1.57
SUMO3P55854 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.22□□□□□ -1.57
SUMO3P55854 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.22□□□□□ -1.57
SUMO3P55854 AC079395.1-201ENST00000510981 262 ntBASIC5.22□□□□□ -1.57
SUMO3P55854 AC021193.1-201ENST00000511607 420 ntBASIC5.22□□□□□ -1.57
SUMO3P55854 AC109471.1-201ENST00000511631 612 ntBASIC5.22□□□□□ -1.57
SUMO3P55854 EIF3KP3-201ENST00000514461 639 ntBASIC5.22□□□□□ -1.57
SUMO3P55854 AC021678.3-201ENST00000517893 476 ntBASIC5.22□□□□□ -1.57
SUMO3P55854 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SUMO3P55854 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SUMO3P55854 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.22□□□□□ -1.57
SUMO3P55854 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
SUMO3P55854 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.22□□□□□ -1.57
SUMO3P55854 IGBP1P1-201ENST00000554337 1009 ntBASIC5.22□□□□□ -1.57
SUMO3P55854 AL132657.2-201ENST00000564417 358 ntBASIC5.22□□□□□ -1.57
SUMO3P55854 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.22□□□□□ -1.57
SUMO3P55854 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.22□□□□□ -1.57
SUMO3P55854 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.22□□□□□ -1.57
SUMO3P55854 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
SUMO3P55854 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SUMO3P55854 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.22□□□□□ -1.57
SUMO3P55854 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SUMO3P55854 AC123786.2-201ENST00000603459 275 ntBASIC5.22□□□□□ -1.57
SUMO3P55854 AC093388.1-201ENST00000609166 430 ntBASIC5.22□□□□□ -1.57
SUMO3P55854 RN7SL544P-201ENST00000617232 284 ntBASIC5.22□□□□□ -1.57
SUMO3P55854 MIR6778-201ENST00000617912 73 ntBASIC5.22□□□□□ -1.57
SUMO3P55854 RN7SL763P-201ENST00000620922 284 ntBASIC5.22□□□□□ -1.57
SUMO3P55854 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.22□□□□□ -1.57
SUMO3P55854 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.22□□□□□ -1.57
SUMO3P55854 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SUMO3P55854 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SUMO3P55854 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SUMO3P55854 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.22□□□□□ -1.57
SUMO3P55854 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SUMO3P55854 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SUMO3P55854 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.22□□□□□ -1.57
SUMO3P55854 NLRP3P1-201ENST00000622303 1785 ntBASIC5.21□□□□□ -1.57
SUMO3P55854 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.21□□□□□ -1.57
SUMO3P55854 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SUMO3P55854 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
SUMO3P55854 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
SUMO3P55854 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SUMO3P55854 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.21□□□□□ -1.58
SUMO3P55854 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.21□□□□□ -1.58
SUMO3P55854 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
SUMO3P55854 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SUMO3P55854 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SUMO3P55854 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.21□□□□□ -1.58
SUMO3P55854 USP9YP4-201ENST00000424401 1745 ntBASIC5.21□□□□□ -1.58
SUMO3P55854 BCORP1-203ENST00000513194 5093 ntBASIC5.21□□□□□ -1.58
SUMO3P55854 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.21□□□□□ -1.58
SUMO3P55854 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SUMO3P55854 RNU6-1066P-201ENST00000363573 105 ntBASIC5.21□□□□□ -1.58
SUMO3P55854 RNU1-146P-201ENST00000364015 165 ntBASIC5.21□□□□□ -1.58
SUMO3P55854 AL161909.1-201ENST00000397390 712 ntBASIC5.21□□□□□ -1.58
SUMO3P55854 MTND4P20-201ENST00000424125 869 ntBASIC5.21□□□□□ -1.58
SUMO3P55854 AC009965.2-201ENST00000425328 970 ntBASIC5.21□□□□□ -1.58
SUMO3P55854 AC009784.1-201ENST00000426484 460 ntBASIC5.21□□□□□ -1.58
SUMO3P55854 AC007559.1-201ENST00000428736 355 ntBASIC5.21□□□□□ -1.58
SUMO3P55854 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.21□□□□□ -1.58
SUMO3P55854 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SUMO3P55854 YWHAZP7-201ENST00000436906 631 ntBASIC5.21□□□□□ -1.58
SUMO3P55854 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.21□□□□□ -1.58
SUMO3P55854 NPM1P19-201ENST00000450070 712 ntBASIC5.21□□□□□ -1.58
SUMO3P55854 RPS7P6-201ENST00000485777 579 ntBASIC5.21□□□□□ -1.58
SUMO3P55854 AC009120.1-201ENST00000493458 473 ntBASIC5.21□□□□□ -1.58
SUMO3P55854 OR7E157P-201ENST00000494376 911 ntBASIC5.21□□□□□ -1.58
SUMO3P55854 AC109445.1-201ENST00000512356 383 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms