Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.46□□□□□ -1.53
NUP98P52948 AL389915.1-201ENST00000422463 466 ntBASIC5.46□□□□□ -1.53
NUP98P52948 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.46□□□□□ -1.53
NUP98P52948 AC006326.1-201ENST00000445465 787 ntBASIC5.46□□□□□ -1.53
NUP98P52948 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.53
NUP98P52948 AL132838.2-201ENST00000492041 314 ntBASIC5.46□□□□□ -1.53
NUP98P52948 RNU1-45P-201ENST00000517191 141 ntBASIC5.46□□□□□ -1.53
NUP98P52948 HMGB1P23-201ENST00000518743 568 ntBASIC5.46□□□□□ -1.53
NUP98P52948 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.46□□□□□ -1.53
NUP98P52948 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.46□□□□□ -1.53
NUP98P52948 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.46□□□□□ -1.53
NUP98P52948 AC106785.1-201ENST00000565935 262 ntBASIC5.46□□□□□ -1.53
NUP98P52948 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.46□□□□□ -1.53
NUP98P52948 Z98200.1-201ENST00000607298 470 ntBASIC5.46□□□□□ -1.53
NUP98P52948 ZYXP1-201ENST00000617638 118 ntBASIC5.46□□□□□ -1.53
NUP98P52948 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.46□□□□□ -1.53
NUP98P52948 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NUP98P52948 EIF3EP2-201ENST00000423042 1814 ntBASIC5.46□□□□□ -1.54
NUP98P52948 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
NUP98P52948 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.46□□□□□ -1.54
NUP98P52948 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NUP98P52948 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NUP98P52948 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
NUP98P52948 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NUP98P52948 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.46□□□□□ -1.54
NUP98P52948 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.46□□□□□ -1.54
NUP98P52948 RPS27AP13-201ENST00000498403 237 ntBASIC5.46□□□□□ -1.54
NUP98P52948 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.46□□□□□ -1.54
NUP98P52948 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.46□□□□□ -1.54
NUP98P52948 AC079587.1-201ENST00000603846 277 ntBASIC5.46□□□□□ -1.54
NUP98P52948 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.46□□□□□ -1.54
NUP98P52948 AC007546.2-201ENST00000623996 360 ntBASIC5.46□□□□□ -1.54
NUP98P52948 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NUP98P52948 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.45□□□□□ -1.54
NUP98P52948 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NUP98P52948 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NUP98P52948 AL133243.3-201ENST00000617415 3004 ntBASIC5.45□□□□□ -1.54
NUP98P52948 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
NUP98P52948 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
NUP98P52948 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.45□□□□□ -1.54
NUP98P52948 RPL36AP36-201ENST00000418616 301 ntBASIC5.45□□□□□ -1.54
NUP98P52948 VTI1BP4-201ENST00000427516 527 ntBASIC5.45□□□□□ -1.54
NUP98P52948 RRM2P4-201ENST00000441721 562 ntBASIC5.45□□□□□ -1.54
NUP98P52948 MRPL48P1-201ENST00000445390 636 ntBASIC5.45□□□□□ -1.54
NUP98P52948 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.45□□□□□ -1.54
NUP98P52948 AC006130.2-201ENST00000586202 326 ntBASIC5.45□□□□□ -1.54
NUP98P52948 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.45□□□□□ -1.54
NUP98P52948 AL669831.5-218ENST00000591702 1873 ntBASIC5.45□□□□□ -1.54
NUP98P52948 AP005435.3-201ENST00000531260 3198 ntBASIC5.45□□□□□ -1.54
NUP98P52948 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
NUP98P52948 RN7SKP280-201ENST00000364196 304 ntBASIC5.44□□□□□ -1.54
NUP98P52948 RAB9AP4-201ENST00000415230 609 ntBASIC5.44□□□□□ -1.54
NUP98P52948 CDY14P-201ENST00000431260 1014 ntBASIC5.44□□□□□ -1.54
NUP98P52948 CDY12P-201ENST00000440679 1015 ntBASIC5.44□□□□□ -1.54
NUP98P52948 CDY13P-201ENST00000445813 1015 ntBASIC5.44□□□□□ -1.54
NUP98P52948 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.44□□□□□ -1.54
NUP98P52948 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.44□□□□□ -1.54
NUP98P52948 CDY23P-201ENST00000451661 1014 ntBASIC5.44□□□□□ -1.54
NUP98P52948 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.44□□□□□ -1.54
NUP98P52948 RPL23AP37-201ENST00000479658 549 ntBASIC5.44□□□□□ -1.54
NUP98P52948 AC104164.2-201ENST00000496953 495 ntBASIC5.44□□□□□ -1.54
NUP98P52948 AC099522.1-202ENST00000514718 367 ntBASIC5.44□□□□□ -1.54
NUP98P52948 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.44□□□□□ -1.54
NUP98P52948 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.44□□□□□ -1.54
NUP98P52948 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.44□□□□□ -1.54
NUP98P52948 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.44□□□□□ -1.54
NUP98P52948 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.44□□□□□ -1.54
NUP98P52948 FAM27D1-201ENST00000612308 341 ntBASIC5.44□□□□□ -1.54
NUP98P52948 AC234782.5-201ENST00000617723 324 ntBASIC5.44□□□□□ -1.54
NUP98P52948 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
NUP98P52948 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NUP98P52948 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
NUP98P52948 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.44□□□□□ -1.54
NUP98P52948 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NUP98P52948 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NUP98P52948 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
NUP98P52948 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.44□□□□□ -1.54
NUP98P52948 AP000473.2-201ENST00000602659 1537 ntBASIC5.44□□□□□ -1.54
NUP98P52948 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
NUP98P52948 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NUP98P52948 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.44□□□□□ -1.54
NUP98P52948 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
NUP98P52948 AC025750.1-201ENST00000399891 379 ntBASIC5.44□□□□□ -1.54
NUP98P52948 AL050305.1-201ENST00000399993 1230 ntBASIC5.44□□□□□ -1.54
NUP98P52948 CTSL3P-202ENST00000412179 788 ntBASIC5.44□□□□□ -1.54
NUP98P52948 AL512326.1-201ENST00000443050 721 ntBASIC5.44□□□□□ -1.54
NUP98P52948 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.44□□□□□ -1.54
NUP98P52948 SNORA84-201ENST00000459229 133 ntBASIC5.44□□□□□ -1.54
NUP98P52948 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.44□□□□□ -1.54
NUP98P52948 RPL21P129-201ENST00000491732 478 ntBASIC5.44□□□□□ -1.54
NUP98P52948 HMGB3P16-201ENST00000508037 287 ntBASIC5.44□□□□□ -1.54
NUP98P52948 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.44□□□□□ -1.54
NUP98P52948 MED28P5-201ENST00000528254 438 ntBASIC5.44□□□□□ -1.54
NUP98P52948 IPO5P1-202ENST00000600039 287 ntBASIC5.44□□□□□ -1.54
NUP98P52948 MIR8059-201ENST00000620427 81 ntBASIC5.44□□□□□ -1.54
NUP98P52948 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.44□□□□□ -1.54
NUP98P52948 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
NUP98P52948 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NUP98P52948 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NUP98P52948 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms