Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC008897.1-201ENST00000494006 347 ntBASIC4.99□□□□□ -1.61
CASP4P49662 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.99□□□□□ -1.61
CASP4P49662 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.99□□□□□ -1.61
CASP4P49662 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CASP4P49662 RPS27AP18-201ENST00000515536 459 ntBASIC4.99□□□□□ -1.61
CASP4P49662 AP001804.2-201ENST00000533932 910 ntBASIC4.99□□□□□ -1.61
CASP4P49662 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.99□□□□□ -1.61
CASP4P49662 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.99□□□□□ -1.61
CASP4P49662 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.99□□□□□ -1.61
CASP4P49662 AC090181.2-201ENST00000602975 672 ntBASIC4.99□□□□□ -1.61
CASP4P49662 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.99□□□□□ -1.61
CASP4P49662 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.99□□□□□ -1.61
CASP4P49662 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CASP4P49662 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CASP4P49662 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CASP4P49662 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CASP4P49662 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CASP4P49662 ZNF137P-201ENST00000456718 1920 ntBASIC4.99□□□□□ -1.61
CASP4P49662 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CASP4P49662 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CASP4P49662 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CASP4P49662 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CASP4P49662 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CASP4P49662 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.98□□□□□ -1.61
CASP4P49662 AC108751.5-201ENST00000492880 1336 ntBASIC4.98□□□□□ -1.61
CASP4P49662 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.98□□□□□ -1.61
CASP4P49662 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.98□□□□□ -1.61
CASP4P49662 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CASP4P49662 VN2R3P-201ENST00000422626 1412 ntBASIC4.98□□□□□ -1.61
CASP4P49662 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CASP4P49662 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.98□□□□□ -1.61
CASP4P49662 OR14L1P-202ENST00000641545 3009 ntBASIC4.98□□□□□ -1.61
CASP4P49662 NEAT1-202ENST00000501122 22743 ntBASIC4.98□□□□□ -1.61
CASP4P49662 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CASP4P49662 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CASP4P49662 MIR585-201ENST00000384887 94 ntBASIC4.98□□□□□ -1.61
CASP4P49662 RN7SKP167-201ENST00000411047 285 ntBASIC4.98□□□□□ -1.61
CASP4P49662 RAB9AP4-201ENST00000415230 609 ntBASIC4.98□□□□□ -1.61
CASP4P49662 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.98□□□□□ -1.61
CASP4P49662 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.98□□□□□ -1.61
CASP4P49662 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CASP4P49662 RN7SKP34-201ENST00000516142 244 ntBASIC4.98□□□□□ -1.61
CASP4P49662 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.98□□□□□ -1.61
CASP4P49662 AP006289.1-201ENST00000538089 277 ntBASIC4.98□□□□□ -1.61
CASP4P49662 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CASP4P49662 DUX4L52-201ENST00000549363 777 ntBASIC4.98□□□□□ -1.61
CASP4P49662 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.98□□□□□ -1.61
CASP4P49662 RN7SL690P-201ENST00000582087 240 ntBASIC4.98□□□□□ -1.61
CASP4P49662 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.98□□□□□ -1.61
CASP4P49662 BNIP3P32-201ENST00000600015 554 ntBASIC4.98□□□□□ -1.61
CASP4P49662 AC097505.1-201ENST00000610199 565 ntBASIC4.98□□□□□ -1.61
CASP4P49662 AL121890.2-201ENST00000617644 465 ntBASIC4.98□□□□□ -1.61
CASP4P49662 AL158062.1-201ENST00000619632 745 ntBASIC4.98□□□□□ -1.61
CASP4P49662 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.98□□□□□ -1.61
CASP4P49662 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.98□□□□□ -1.61
CASP4P49662 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.98□□□□□ -1.61
CASP4P49662 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CASP4P49662 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CASP4P49662 AC108467.2-201ENST00000617640 1597 ntBASIC4.98□□□□□ -1.61
CASP4P49662 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CASP4P49662 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CASP4P49662 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CASP4P49662 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CASP4P49662 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CASP4P49662 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CASP4P49662 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CASP4P49662 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.97□□□□□ -1.61
CASP4P49662 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CASP4P49662 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CASP4P49662 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.97□□□□□ -1.61
CASP4P49662 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.97□□□□□ -1.61
CASP4P49662 CASC19-204ENST00000641001 2055 ntBASIC4.97□□□□□ -1.61
CASP4P49662 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.97□□□□□ -1.61
CASP4P49662 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.97□□□□□ -1.61
CASP4P49662 RN7SKP115-201ENST00000363177 317 ntBASIC4.97□□□□□ -1.61
CASP4P49662 RNA5SP505-201ENST00000364748 108 ntBASIC4.97□□□□□ -1.61
CASP4P49662 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CASP4P49662 BMS1P3-201ENST00000372011 932 ntBASIC4.97□□□□□ -1.61
CASP4P49662 Z98745.1-201ENST00000402553 494 ntBASIC4.97□□□□□ -1.61
CASP4P49662 AC069213.2-201ENST00000420238 366 ntBASIC4.97□□□□□ -1.61
CASP4P49662 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.97□□□□□ -1.61
CASP4P49662 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.97□□□□□ -1.61
CASP4P49662 AL359265.2-201ENST00000434367 631 ntBASIC4.97□□□□□ -1.61
CASP4P49662 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.97□□□□□ -1.61
CASP4P49662 AL591363.1-201ENST00000450091 483 ntBASIC4.97□□□□□ -1.61
CASP4P49662 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.97□□□□□ -1.61
CASP4P49662 ATP5G1P3-201ENST00000463301 410 ntBASIC4.97□□□□□ -1.61
CASP4P49662 AGGF1P3-201ENST00000493675 1213 ntBASIC4.97□□□□□ -1.61
CASP4P49662 AP001781.1-201ENST00000530977 207 ntBASIC4.97□□□□□ -1.61
CASP4P49662 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.97□□□□□ -1.61
CASP4P49662 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.97□□□□□ -1.61
CASP4P49662 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.97□□□□□ -1.61
CASP4P49662 ADAD1P2-201ENST00000588476 646 ntBASIC4.97□□□□□ -1.61
CASP4P49662 AL133338.2-201ENST00000604292 736 ntBASIC4.97□□□□□ -1.61
CASP4P49662 AC067838.1-201ENST00000606064 577 ntBASIC4.97□□□□□ -1.61
CASP4P49662 AL133406.3-201ENST00000606817 541 ntBASIC4.97□□□□□ -1.61
CASP4P49662 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.97□□□□□ -1.61
CASP4P49662 MIR6780A-201ENST00000615089 68 ntBASIC4.97□□□□□ -1.61
CASP4P49662 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.97□□□□□ -1.61
CASP4P49662 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms