Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTPN6P29350 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.66□□□□□ -1.66
PTPN6P29350 AL592291.1-201ENST00000403830 352 ntBASIC4.66□□□□□ -1.66
PTPN6P29350 AP000580.1-201ENST00000404439 358 ntBASIC4.66□□□□□ -1.66
PTPN6P29350 RNU6-603P-201ENST00000411403 107 ntBASIC4.66□□□□□ -1.66
PTPN6P29350 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.66□□□□□ -1.66
PTPN6P29350 RPS26P13-201ENST00000419030 330 ntBASIC4.66□□□□□ -1.66
PTPN6P29350 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.66□□□□□ -1.66
PTPN6P29350 RGS17P1-201ENST00000423358 553 ntBASIC4.66□□□□□ -1.66
PTPN6P29350 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.66□□□□□ -1.66
PTPN6P29350 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.66□□□□□ -1.66
PTPN6P29350 AC114878.1-201ENST00000441166 358 ntBASIC4.66□□□□□ -1.66
PTPN6P29350 Z99127.2-201ENST00000441426 334 ntBASIC4.66□□□□□ -1.66
PTPN6P29350 AC092647.3-201ENST00000443044 633 ntBASIC4.66□□□□□ -1.66
PTPN6P29350 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.66□□□□□ -1.66
PTPN6P29350 AP002345.1-201ENST00000456493 928 ntBASIC4.66□□□□□ -1.66
PTPN6P29350 METTL15P1-201ENST00000481421 1045 ntBASIC4.66□□□□□ -1.66
PTPN6P29350 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PTPN6P29350 NDUFA5P12-201ENST00000503796 343 ntBASIC4.66□□□□□ -1.66
PTPN6P29350 AC002456.2-201ENST00000509356 380 ntBASIC4.66□□□□□ -1.66
PTPN6P29350 FABP5P6-201ENST00000510588 409 ntBASIC4.66□□□□□ -1.66
PTPN6P29350 RNA5SP392-201ENST00000516905 112 ntBASIC4.66□□□□□ -1.66
PTPN6P29350 RN7SKP147-201ENST00000517154 244 ntBASIC4.66□□□□□ -1.66
PTPN6P29350 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
PTPN6P29350 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
PTPN6P29350 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.66□□□□□ -1.66
PTPN6P29350 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.66□□□□□ -1.66
PTPN6P29350 AC093799.2-201ENST00000610062 578 ntBASIC4.66□□□□□ -1.66
PTPN6P29350 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.66□□□□□ -1.66
PTPN6P29350 AL049794.2-201ENST00000616301 365 ntBASIC4.66□□□□□ -1.66
PTPN6P29350 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.66□□□□□ -1.66
PTPN6P29350 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PTPN6P29350 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PTPN6P29350 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.66□□□□□ -1.66
PTPN6P29350 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTPN6P29350 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTPN6P29350 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTPN6P29350 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PTPN6P29350 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTPN6P29350 ZNF652P1-201ENST00000442420 1309 ntBASIC4.66□□□□□ -1.66
PTPN6P29350 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTPN6P29350 AL034370.1-201ENST00000397254 1590 ntBASIC4.65□□□□□ -1.66
PTPN6P29350 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.65□□□□□ -1.66
PTPN6P29350 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.65□□□□□ -1.66
PTPN6P29350 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
PTPN6P29350 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
PTPN6P29350 AL133268.1-201ENST00000405676 1401 ntBASIC4.65□□□□□ -1.66
PTPN6P29350 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
PTPN6P29350 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PTPN6P29350 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.65□□□□□ -1.66
PTPN6P29350 SCARNA15-201ENST00000607520 4325 ntBASIC4.65□□□□□ -1.66
PTPN6P29350 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
PTPN6P29350 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PTPN6P29350 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
PTPN6P29350 AL589647.1-201ENST00000402485 466 ntBASIC4.65□□□□□ -1.67
PTPN6P29350 AL589655.1-201ENST00000405398 482 ntBASIC4.65□□□□□ -1.67
PTPN6P29350 U3.35-201ENST00000408405 208 ntBASIC4.65□□□□□ -1.67
PTPN6P29350 OR13Z1P-201ENST00000416141 834 ntBASIC4.65□□□□□ -1.67
PTPN6P29350 AC073136.2-201ENST00000417282 849 ntBASIC4.65□□□□□ -1.67
PTPN6P29350 EIF4A1P1-201ENST00000420241 934 ntBASIC4.65□□□□□ -1.67
PTPN6P29350 FABP7P2-201ENST00000429946 379 ntBASIC4.65□□□□□ -1.67
PTPN6P29350 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.65□□□□□ -1.67
PTPN6P29350 HMGB3P9-201ENST00000441799 583 ntBASIC4.65□□□□□ -1.67
PTPN6P29350 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.65□□□□□ -1.67
PTPN6P29350 AL645937.3-201ENST00000453647 936 ntBASIC4.65□□□□□ -1.67
PTPN6P29350 HMGN2P25-201ENST00000486956 268 ntBASIC4.65□□□□□ -1.67
PTPN6P29350 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.65□□□□□ -1.67
PTPN6P29350 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.65□□□□□ -1.67
PTPN6P29350 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.65□□□□□ -1.67
PTPN6P29350 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PTPN6P29350 AC034244.2-201ENST00000514668 858 ntBASIC4.65□□□□□ -1.67
PTPN6P29350 RNA5SP464-201ENST00000516251 108 ntBASIC4.65□□□□□ -1.67
PTPN6P29350 RNA5SP43-201ENST00000516559 110 ntBASIC4.65□□□□□ -1.67
PTPN6P29350 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PTPN6P29350 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PTPN6P29350 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.65□□□□□ -1.67
PTPN6P29350 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PTPN6P29350 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.65□□□□□ -1.67
PTPN6P29350 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PTPN6P29350 AC018552.3-201ENST00000567416 561 ntBASIC4.65□□□□□ -1.67
PTPN6P29350 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.65□□□□□ -1.67
PTPN6P29350 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.65□□□□□ -1.67
PTPN6P29350 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.65□□□□□ -1.67
PTPN6P29350 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.65□□□□□ -1.67
PTPN6P29350 AC005229.3-201ENST00000603438 323 ntBASIC4.65□□□□□ -1.67
PTPN6P29350 AC087783.2-201ENST00000605070 562 ntBASIC4.65□□□□□ -1.67
PTPN6P29350 AL627230.1-201ENST00000613077 211 ntBASIC4.65□□□□□ -1.67
PTPN6P29350 AL591926.8-201ENST00000616876 211 ntBASIC4.65□□□□□ -1.67
PTPN6P29350 LINC00216-201ENST00000623548 1126 ntBASIC4.65□□□□□ -1.67
PTPN6P29350 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.65□□□□□ -1.67
PTPN6P29350 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PTPN6P29350 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.65□□□□□ -1.67
PTPN6P29350 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
PTPN6P29350 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.65□□□□□ -1.67
PTPN6P29350 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
PTPN6P29350 DDX18P5-201ENST00000534547 1306 ntBASIC4.65□□□□□ -1.67
PTPN6P29350 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PTPN6P29350 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PTPN6P29350 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.64□□□□□ -1.67
PTPN6P29350 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms