Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.94□□□□□ -1.62
CDH3P22223 MTND2P2-201ENST00000434633 945 ntBASIC4.94□□□□□ -1.62
CDH3P22223 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.94□□□□□ -1.62
CDH3P22223 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH3P22223 CASP3P1-201ENST00000446037 609 ntBASIC4.94□□□□□ -1.62
CDH3P22223 VN1R48P-201ENST00000448149 1036 ntBASIC4.94□□□□□ -1.62
CDH3P22223 RN7SL443P-201ENST00000464331 290 ntBASIC4.94□□□□□ -1.62
CDH3P22223 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
CDH3P22223 NDUFB5P1-201ENST00000508134 564 ntBASIC4.94□□□□□ -1.62
CDH3P22223 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH3P22223 IMPA1P1-201ENST00000510718 842 ntBASIC4.94□□□□□ -1.62
CDH3P22223 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH3P22223 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH3P22223 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH3P22223 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH3P22223 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CDH3P22223 AC022882.1-201ENST00000532142 501 ntBASIC4.94□□□□□ -1.62
CDH3P22223 PDCD5P1-201ENST00000543528 309 ntBASIC4.94□□□□□ -1.62
CDH3P22223 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CDH3P22223 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH3P22223 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH3P22223 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH3P22223 RN7SL52P-201ENST00000584271 284 ntBASIC4.94□□□□□ -1.62
CDH3P22223 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH3P22223 AL158211.2-201ENST00000607282 395 ntBASIC4.94□□□□□ -1.62
CDH3P22223 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH3P22223 AC015914.2-201ENST00000618167 288 ntBASIC4.94□□□□□ -1.62
CDH3P22223 MIR6839-201ENST00000620425 113 ntBASIC4.94□□□□□ -1.62
CDH3P22223 AL353662.3-201ENST00000625131 237 ntBASIC4.94□□□□□ -1.62
CDH3P22223 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH3P22223 SCN1A-220ENST00000641603 12506 ntBASIC4.94□□□□□ -1.62
CDH3P22223 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH3P22223 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH3P22223 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH3P22223 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CDH3P22223 AL445437.1-201ENST00000623157 3087 ntBASIC4.93□□□□□ -1.62
CDH3P22223 AL451142.2-201ENST00000429076 2090 ntBASIC4.93□□□□□ -1.62
CDH3P22223 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
CDH3P22223 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH3P22223 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH3P22223 AC010132.2-201ENST00000295493 1043 ntBASIC4.93□□□□□ -1.62
CDH3P22223 RNU4-7P-201ENST00000364758 141 ntBASIC4.93□□□□□ -1.62
CDH3P22223 GJA6P-201ENST00000415117 1042 ntBASIC4.93□□□□□ -1.62
CDH3P22223 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.93□□□□□ -1.62
CDH3P22223 RPS26P47-201ENST00000427219 348 ntBASIC4.93□□□□□ -1.62
CDH3P22223 AC073508.1-201ENST00000428866 656 ntBASIC4.93□□□□□ -1.62
CDH3P22223 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH3P22223 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH3P22223 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.93□□□□□ -1.62
CDH3P22223 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH3P22223 EIF4A1P11-201ENST00000451239 222 ntBASIC4.93□□□□□ -1.62
CDH3P22223 RPL7P61-201ENST00000451721 751 ntBASIC4.93□□□□□ -1.62
CDH3P22223 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.93□□□□□ -1.62
CDH3P22223 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH3P22223 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH3P22223 RN7SL244P-201ENST00000493405 297 ntBASIC4.93□□□□□ -1.62
CDH3P22223 AC097173.1-201ENST00000505862 819 ntBASIC4.93□□□□□ -1.62
CDH3P22223 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH3P22223 AC016550.3-201ENST00000515706 767 ntBASIC4.93□□□□□ -1.62
CDH3P22223 AC109635.6-201ENST00000525487 1113 ntBASIC4.93□□□□□ -1.62
CDH3P22223 AP003049.1-201ENST00000529418 457 ntBASIC4.93□□□□□ -1.62
CDH3P22223 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.93□□□□□ -1.62
CDH3P22223 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.93□□□□□ -1.62
CDH3P22223 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH3P22223 AL450270.1-201ENST00000606160 391 ntBASIC4.93□□□□□ -1.62
CDH3P22223 AC133644.2-201ENST00000608142 540 ntBASIC4.93□□□□□ -1.62
CDH3P22223 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CDH3P22223 AP006248.3-201ENST00000623580 594 ntBASIC4.93□□□□□ -1.62
CDH3P22223 MAPK10-304ENST00000641341 3984 ntBASIC4.93□□□□□ -1.62
CDH3P22223 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH3P22223 UGT2B26P-201ENST00000508672 1613 ntBASIC4.93□□□□□ -1.62
CDH3P22223 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH3P22223 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH3P22223 AC006210.2-201ENST00000367074 1545 ntBASIC4.92□□□□□ -1.62
CDH3P22223 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH3P22223 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDH3P22223 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH3P22223 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CDH3P22223 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH3P22223 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH3P22223 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH3P22223 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH3P22223 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CDH3P22223 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH3P22223 SNORA66-201ENST00000384792 133 ntBASIC4.92□□□□□ -1.62
CDH3P22223 SNORD65-201ENST00000391079 73 ntBASIC4.92□□□□□ -1.62
CDH3P22223 AL356057.1-202ENST00000402263 756 ntBASIC4.92□□□□□ -1.62
CDH3P22223 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDH3P22223 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH3P22223 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDH3P22223 AC023141.6-201ENST00000429418 337 ntBASIC4.92□□□□□ -1.62
CDH3P22223 RPS26P4-201ENST00000431743 355 ntBASIC4.92□□□□□ -1.62
CDH3P22223 VN1R54P-201ENST00000435210 1049 ntBASIC4.92□□□□□ -1.62
CDH3P22223 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH3P22223 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH3P22223 OTX2P1-201ENST00000450956 354 ntBASIC4.92□□□□□ -1.62
CDH3P22223 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH3P22223 APOOP2-201ENST00000461561 539 ntBASIC4.92□□□□□ -1.62
CDH3P22223 AC091180.1-201ENST00000462104 372 ntBASIC4.92□□□□□ -1.62
CDH3P22223 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms