Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 UBE2V1P3-201ENST00000439651 417 ntBASIC4.52□□□□□ -1.69
HLA-DQB2P05538 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DQB2P05538 RPS27AP15-201ENST00000447672 466 ntBASIC4.52□□□□□ -1.69
HLA-DQB2P05538 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DQB2P05538 RPS29P22-201ENST00000472363 168 ntBASIC4.52□□□□□ -1.69
HLA-DQB2P05538 RPL23AP65-201ENST00000475608 468 ntBASIC4.52□□□□□ -1.69
HLA-DQB2P05538 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DQB2P05538 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DQB2P05538 RNU6-1334P-201ENST00000516032 105 ntBASIC4.52□□□□□ -1.69
HLA-DQB2P05538 RNA5SP497-201ENST00000516081 97 ntBASIC4.52□□□□□ -1.69
HLA-DQB2P05538 AP001160.4-201ENST00000596971 382 ntBASIC4.52□□□□□ -1.69
HLA-DQB2P05538 AC012409.3-201ENST00000611343 981 ntBASIC4.52□□□□□ -1.69
HLA-DQB2P05538 AP000346.3-201ENST00000622821 210 ntBASIC4.52□□□□□ -1.69
HLA-DQB2P05538 AC007546.2-201ENST00000623996 360 ntBASIC4.52□□□□□ -1.69
HLA-DQB2P05538 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DQB2P05538 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HLA-DQB2P05538 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQB2P05538 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQB2P05538 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQB2P05538 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.52□□□□□ -1.69
HLA-DQB2P05538 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQB2P05538 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DQB2P05538 MAPK10-320ENST00000641462 6696 ntBASIC4.51□□□□□ -1.69
HLA-DQB2P05538 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DQB2P05538 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.51□□□□□ -1.69
HLA-DQB2P05538 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
HLA-DQB2P05538 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DQB2P05538 AC008033.1-201ENST00000216407 1162 ntBASIC4.51□□□□□ -1.69
HLA-DQB2P05538 RNA5SP307-201ENST00000362863 116 ntBASIC4.51□□□□□ -1.69
HLA-DQB2P05538 RPS20P14-201ENST00000412545 360 ntBASIC4.51□□□□□ -1.69
HLA-DQB2P05538 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.51□□□□□ -1.69
HLA-DQB2P05538 AC004448.2-201ENST00000422360 586 ntBASIC4.51□□□□□ -1.69
HLA-DQB2P05538 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DQB2P05538 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.51□□□□□ -1.69
HLA-DQB2P05538 AC092905.1-201ENST00000467527 949 ntBASIC4.51□□□□□ -1.69
HLA-DQB2P05538 RN7SL817P-201ENST00000480777 288 ntBASIC4.51□□□□□ -1.69
HLA-DQB2P05538 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DQB2P05538 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DQB2P05538 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DQB2P05538 RN7SKP92-201ENST00000517266 244 ntBASIC4.51□□□□□ -1.69
HLA-DQB2P05538 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DQB2P05538 AC090151.1-201ENST00000520784 730 ntBASIC4.51□□□□□ -1.69
HLA-DQB2P05538 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DQB2P05538 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DQB2P05538 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.51□□□□□ -1.69
HLA-DQB2P05538 GSTP1P1-201ENST00000548078 319 ntBASIC4.51□□□□□ -1.69
HLA-DQB2P05538 AC233702.9-201ENST00000581528 203 ntBASIC4.51□□□□□ -1.69
HLA-DQB2P05538 AC020915.5-201ENST00000596836 964 ntBASIC4.51□□□□□ -1.69
HLA-DQB2P05538 AC234771.5-201ENST00000600161 514 ntBASIC4.51□□□□□ -1.69
HLA-DQB2P05538 AC093765.1-201ENST00000603758 881 ntBASIC4.51□□□□□ -1.69
HLA-DQB2P05538 Z98200.1-201ENST00000607298 470 ntBASIC4.51□□□□□ -1.69
HLA-DQB2P05538 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DQB2P05538 uc_338.18-201ENST00000615451 175 ntBASIC4.51□□□□□ -1.69
HLA-DQB2P05538 AP005019.3-201ENST00000620418 560 ntBASIC4.51□□□□□ -1.69
HLA-DQB2P05538 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DQB2P05538 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
HLA-DQB2P05538 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DQB2P05538 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DQB2P05538 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DQB2P05538 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DQB2P05538 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
HLA-DQB2P05538 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DQB2P05538 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
HLA-DQB2P05538 AC092435.4-201ENST00000623012 4159 ntBASIC4.51□□□□□ -1.69
HLA-DQB2P05538 AC120338.1-201ENST00000625074 1541 ntBASIC4.51□□□□□ -1.69
HLA-DQB2P05538 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DQB2P05538 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQB2P05538 AL137100.1-201ENST00000556703 1620 ntBASIC4.5□□□□□ -1.69
HLA-DQB2P05538 AL513548.1-201ENST00000562904 1724 ntBASIC4.5□□□□□ -1.69
HLA-DQB2P05538 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQB2P05538 SNORA74C-2-201ENST00000411179 201 ntBASIC4.5□□□□□ -1.69
HLA-DQB2P05538 CEACAMP8-201ENST00000413902 580 ntBASIC4.5□□□□□ -1.69
HLA-DQB2P05538 RPL26P29-201ENST00000415623 438 ntBASIC4.5□□□□□ -1.69
HLA-DQB2P05538 TMSB10P2-201ENST00000416049 131 ntBASIC4.5□□□□□ -1.69
HLA-DQB2P05538 AL139095.3-201ENST00000419672 1203 ntBASIC4.5□□□□□ -1.69
HLA-DQB2P05538 CENPIP1-201ENST00000425713 902 ntBASIC4.5□□□□□ -1.69
HLA-DQB2P05538 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQB2P05538 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DQB2P05538 DHFRP3-201ENST00000455595 559 ntBASIC4.5□□□□□ -1.69
HLA-DQB2P05538 AC053481.1-201ENST00000467217 306 ntBASIC4.5□□□□□ -1.69
HLA-DQB2P05538 AK3P4-201ENST00000504283 583 ntBASIC4.5□□□□□ -1.69
HLA-DQB2P05538 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DQB2P05538 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DQB2P05538 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DQB2P05538 DPRXP4-201ENST00000578053 568 ntBASIC4.5□□□□□ -1.69
HLA-DQB2P05538 SLC25A36P1-201ENST00000590111 465 ntBASIC4.5□□□□□ -1.69
HLA-DQB2P05538 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DQB2P05538 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQB2P05538 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DQB2P05538 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DQB2P05538 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DQB2P05538 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
HLA-DQB2P05538 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DQB2P05538 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DQB2P05538 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.49□□□□□ -1.69
HLA-DQB2P05538 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQB2P05538 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQB2P05538 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQB2P05538 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
HLA-DQB2P05538 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms