Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CD74P04233 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CD74P04233 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CD74P04233 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.97□□□□□ -1.77
CD74P04233 AC011493.1-201ENST00000596753 1632 ntBASIC3.97□□□□□ -1.77
CD74P04233 U3.2-201ENST00000362981 210 ntBASIC3.97□□□□□ -1.77
CD74P04233 RNU4-7P-201ENST00000364758 141 ntBASIC3.97□□□□□ -1.77
CD74P04233 SNORA70-201ENST00000384436 135 ntBASIC3.97□□□□□ -1.77
CD74P04233 MIR93-201ENST00000385024 80 ntBASIC3.97□□□□□ -1.77
CD74P04233 RN7SKP167-201ENST00000411047 285 ntBASIC3.97□□□□□ -1.77
CD74P04233 NPM1P4-201ENST00000414095 812 ntBASIC3.97□□□□□ -1.77
CD74P04233 ATP6V1G1P7-201ENST00000415853 349 ntBASIC3.97□□□□□ -1.77
CD74P04233 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.97□□□□□ -1.77
CD74P04233 AF186996.5-201ENST00000418098 904 ntBASIC3.97□□□□□ -1.77
CD74P04233 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.97□□□□□ -1.77
CD74P04233 GLUD1P9-201ENST00000420997 1173 ntBASIC3.97□□□□□ -1.77
CD74P04233 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CD74P04233 GAPDHP49-201ENST00000421421 961 ntBASIC3.97□□□□□ -1.77
CD74P04233 AC099336.2-201ENST00000422457 254 ntBASIC3.97□□□□□ -1.77
CD74P04233 AL355994.1-201ENST00000424379 260 ntBASIC3.97□□□□□ -1.77
CD74P04233 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC3.97□□□□□ -1.77
CD74P04233 RPS26P47-201ENST00000427219 348 ntBASIC3.97□□□□□ -1.77
CD74P04233 HNRNPA3P4-201ENST00000427514 803 ntBASIC3.97□□□□□ -1.77
CD74P04233 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.97□□□□□ -1.77
CD74P04233 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.97□□□□□ -1.77
CD74P04233 AL354710.1-201ENST00000453641 246 ntBASIC3.97□□□□□ -1.77
CD74P04233 AC099560.2-201ENST00000457554 255 ntBASIC3.97□□□□□ -1.77
CD74P04233 AC110749.1-201ENST00000462007 357 ntBASIC3.97□□□□□ -1.77
CD74P04233 AC090013.1-201ENST00000485147 480 ntBASIC3.97□□□□□ -1.77
CD74P04233 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CD74P04233 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.97□□□□□ -1.77
CD74P04233 AP001960.1-201ENST00000506494 658 ntBASIC3.97□□□□□ -1.77
CD74P04233 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC3.97□□□□□ -1.77
CD74P04233 MTCO3P42-201ENST00000509488 518 ntBASIC3.97□□□□□ -1.77
CD74P04233 PPBPP1-201ENST00000510807 373 ntBASIC3.97□□□□□ -1.77
CD74P04233 MTCO3P39-201ENST00000514812 518 ntBASIC3.97□□□□□ -1.77
CD74P04233 BX510359.5-201ENST00000515651 304 ntBASIC3.97□□□□□ -1.77
CD74P04233 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CD74P04233 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC3.97□□□□□ -1.77
CD74P04233 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.97□□□□□ -1.77
CD74P04233 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC3.97□□□□□ -1.77
CD74P04233 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.97□□□□□ -1.77
CD74P04233 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.97□□□□□ -1.77
CD74P04233 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC3.97□□□□□ -1.77
CD74P04233 OR1F2P-201ENST00000570470 933 ntBASIC3.97□□□□□ -1.77
CD74P04233 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.97□□□□□ -1.77
CD74P04233 MIR4443-201ENST00000585052 53 ntBASIC3.97□□□□□ -1.77
CD74P04233 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC3.97□□□□□ -1.77
CD74P04233 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC3.97□□□□□ -1.77
CD74P04233 AC013244.1-201ENST00000604279 193 ntBASIC3.97□□□□□ -1.77
CD74P04233 AC008966.2-201ENST00000606157 453 ntBASIC3.97□□□□□ -1.77
CD74P04233 AC090948.2-201ENST00000607363 564 ntBASIC3.97□□□□□ -1.77
CD74P04233 SNORA35B-201ENST00000607417 129 ntBASIC3.97□□□□□ -1.77
CD74P04233 AL359513.1-201ENST00000614364 557 ntBASIC3.97□□□□□ -1.77
CD74P04233 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC3.97□□□□□ -1.77
CD74P04233 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.97□□□□□ -1.77
CD74P04233 AC099494.2-201ENST00000623371 978 ntBASIC3.97□□□□□ -1.77
CD74P04233 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.97□□□□□ -1.77
CD74P04233 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.97□□□□□ -1.77
CD74P04233 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.97□□□□□ -1.77
CD74P04233 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CD74P04233 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CD74P04233 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CD74P04233 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
CD74P04233 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CD74P04233 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CD74P04233 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CD74P04233 RNU6-984P-201ENST00000363236 109 ntBASIC3.96□□□□□ -1.78
CD74P04233 RN7SKP162-201ENST00000363605 345 ntBASIC3.96□□□□□ -1.78
CD74P04233 RNA5SP151-201ENST00000365632 117 ntBASIC3.96□□□□□ -1.78
CD74P04233 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.96□□□□□ -1.78
CD74P04233 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC3.96□□□□□ -1.78
CD74P04233 MIR1178-201ENST00000408396 91 ntBASIC3.96□□□□□ -1.78
CD74P04233 RNA5SP104-201ENST00000410989 118 ntBASIC3.96□□□□□ -1.78
CD74P04233 RN7SKP126-201ENST00000411143 300 ntBASIC3.96□□□□□ -1.78
CD74P04233 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.96□□□□□ -1.78
CD74P04233 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.96□□□□□ -1.78
CD74P04233 AL645608.4-201ENST00000423619 154 ntBASIC3.96□□□□□ -1.78
CD74P04233 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC3.96□□□□□ -1.78
CD74P04233 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC3.96□□□□□ -1.78
CD74P04233 RPS20P1-201ENST00000434853 354 ntBASIC3.96□□□□□ -1.78
CD74P04233 MAPRE1P3-201ENST00000435438 796 ntBASIC3.96□□□□□ -1.78
CD74P04233 AC092647.2-201ENST00000452998 253 ntBASIC3.96□□□□□ -1.78
CD74P04233 CLIC4P1-201ENST00000453177 535 ntBASIC3.96□□□□□ -1.78
CD74P04233 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.96□□□□□ -1.78
CD74P04233 RN7SL222P-201ENST00000476452 299 ntBASIC3.96□□□□□ -1.78
CD74P04233 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.96□□□□□ -1.78
CD74P04233 HMGN2P25-201ENST00000486956 268 ntBASIC3.96□□□□□ -1.78
CD74P04233 RN7SL244P-201ENST00000493405 297 ntBASIC3.96□□□□□ -1.78
CD74P04233 AC025164.1-201ENST00000496249 478 ntBASIC3.96□□□□□ -1.78
CD74P04233 AC025445.1-201ENST00000502728 300 ntBASIC3.96□□□□□ -1.78
CD74P04233 AC113398.2-201ENST00000507630 558 ntBASIC3.96□□□□□ -1.78
CD74P04233 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.96□□□□□ -1.78
CD74P04233 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC3.96□□□□□ -1.78
CD74P04233 HMGB3P13-201ENST00000511263 607 ntBASIC3.96□□□□□ -1.78
CD74P04233 AC015795.1-201ENST00000513669 327 ntBASIC3.96□□□□□ -1.78
CD74P04233 IGLV3-26-201ENST00000520756 302 ntBASIC3.96□□□□□ -1.78
CD74P04233 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CD74P04233 OR10G5P-201ENST00000532733 358 ntBASIC3.96□□□□□ -1.78
CD74P04233 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms