Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SPTA1P02549 AL591135.1-201ENST00000401578 5914 ntBASIC4.21□□□□□ -1.74
SPTA1P02549 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.21□□□□□ -1.74
SPTA1P02549 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SPTA1P02549 EIF4A1P3-201ENST00000411521 244 ntBASIC4.21□□□□□ -1.74
SPTA1P02549 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.21□□□□□ -1.74
SPTA1P02549 SNX18P1Y-201ENST00000616231 511 ntBASIC4.21□□□□□ -1.74
SPTA1P02549 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
SPTA1P02549 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC4.21□□□□□ -1.74
SPTA1P02549 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
SPTA1P02549 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SPTA1P02549 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.21□□□□□ -1.74
SPTA1P02549 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SPTA1P02549 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
SPTA1P02549 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SPTA1P02549 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.21□□□□□ -1.74
SPTA1P02549 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SPTA1P02549 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.21□□□□□ -1.74
SPTA1P02549 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SPTA1P02549 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC4.21□□□□□ -1.74
SPTA1P02549 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC4.21□□□□□ -1.74
SPTA1P02549 RNA5SP345-201ENST00000410646 108 ntBASIC4.21□□□□□ -1.74
SPTA1P02549 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC4.21□□□□□ -1.74
SPTA1P02549 OR5BC1P-201ENST00000529327 739 ntBASIC4.21□□□□□ -1.74
SPTA1P02549 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
SPTA1P02549 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.21□□□□□ -1.74
SPTA1P02549 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SPTA1P02549 AC012409.3-201ENST00000611343 981 ntBASIC4.21□□□□□ -1.74
SPTA1P02549 AC108359.1-201ENST00000616451 1211 ntBASIC4.21□□□□□ -1.74
SPTA1P02549 AL023881.1-201ENST00000621088 301 ntBASIC4.21□□□□□ -1.74
SPTA1P02549 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SPTA1P02549 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.21□□□□□ -1.74
SPTA1P02549 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SPTA1P02549 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
SPTA1P02549 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SPTA1P02549 CASC19-204ENST00000641001 2055 ntBASIC4.2□□□□□ -1.74
SPTA1P02549 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SPTA1P02549 AP000756.2-201ENST00000624168 2567 ntBASIC4.2□□□□□ -1.74
SPTA1P02549 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SPTA1P02549 RNA5SP366-201ENST00000365454 123 ntBASIC4.2□□□□□ -1.74
SPTA1P02549 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.2□□□□□ -1.74
SPTA1P02549 AL158827.1-201ENST00000416300 391 ntBASIC4.2□□□□□ -1.74
SPTA1P02549 AC114814.2-201ENST00000419195 485 ntBASIC4.2□□□□□ -1.74
SPTA1P02549 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.2□□□□□ -1.74
SPTA1P02549 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SPTA1P02549 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.2□□□□□ -1.74
SPTA1P02549 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.2□□□□□ -1.74
SPTA1P02549 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.2□□□□□ -1.74
SPTA1P02549 AC040958.1-201ENST00000561102 201 ntBASIC4.2□□□□□ -1.74
SPTA1P02549 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.2□□□□□ -1.74
SPTA1P02549 AC087499.8-201ENST00000578406 226 ntBASIC4.2□□□□□ -1.74
SPTA1P02549 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SPTA1P02549 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SPTA1P02549 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.2□□□□□ -1.74
SPTA1P02549 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SPTA1P02549 STX3-208ENST00000641815 3236 ntBASIC4.2□□□□□ -1.74
SPTA1P02549 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SPTA1P02549 AC021146.4-201ENST00000309229 279 ntBASIC4.2□□□□□ -1.74
SPTA1P02549 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SPTA1P02549 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.2□□□□□ -1.74
SPTA1P02549 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.2□□□□□ -1.74
SPTA1P02549 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.2□□□□□ -1.74
SPTA1P02549 NDUFB4P11-201ENST00000560510 395 ntBASIC4.2□□□□□ -1.74
SPTA1P02549 MIR5699-201ENST00000578903 90 ntBASIC4.2□□□□□ -1.74
SPTA1P02549 AP001160.4-201ENST00000596971 382 ntBASIC4.2□□□□□ -1.74
SPTA1P02549 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC4.2□□□□□ -1.74
SPTA1P02549 AC100847.1-201ENST00000611316 481 ntBASIC4.2□□□□□ -1.74
SPTA1P02549 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.2□□□□□ -1.74
SPTA1P02549 AL139254.3-201ENST00000641097 674 ntBASIC4.2□□□□□ -1.74
SPTA1P02549 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.19□□□□□ -1.74
SPTA1P02549 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
SPTA1P02549 OR56B2P-202ENST00000641377 2453 ntBASIC4.19□□□□□ -1.74
SPTA1P02549 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SPTA1P02549 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.19□□□□□ -1.74
SPTA1P02549 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SPTA1P02549 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SPTA1P02549 MT-RNR1-201ENST00000389680 954 ntBASIC4.19□□□□□ -1.74
SPTA1P02549 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SPTA1P02549 AC023271.1-201ENST00000445936 1090 ntBASIC4.19□□□□□ -1.74
SPTA1P02549 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.19□□□□□ -1.74
SPTA1P02549 GMPSP1-201ENST00000514075 579 ntBASIC4.19□□□□□ -1.74
SPTA1P02549 AC079064.1-201ENST00000528365 362 ntBASIC4.19□□□□□ -1.74
SPTA1P02549 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.19□□□□□ -1.74
SPTA1P02549 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.19□□□□□ -1.74
SPTA1P02549 MIR4286-201ENST00000580651 93 ntBASIC4.19□□□□□ -1.74
SPTA1P02549 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.19□□□□□ -1.74
SPTA1P02549 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.19□□□□□ -1.74
SPTA1P02549 AC073137.1-201ENST00000605636 634 ntBASIC4.19□□□□□ -1.74
SPTA1P02549 MIR3653-201ENST00000625572 110 ntBASIC4.19□□□□□ -1.74
SPTA1P02549 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SPTA1P02549 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
SPTA1P02549 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
SPTA1P02549 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SPTA1P02549 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SPTA1P02549 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SPTA1P02549 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SPTA1P02549 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SPTA1P02549 AC068769.1-201ENST00000474767 2426 ntBASIC4.19□□□□□ -1.74
SPTA1P02549 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC4.19□□□□□ -1.74
SPTA1P02549 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms