Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.68□□□□□ -1.66
PDLIM1O00151 AC022431.1-201ENST00000450941 438 ntBASIC4.68□□□□□ -1.66
PDLIM1O00151 MTND3P4-201ENST00000453537 303 ntBASIC4.68□□□□□ -1.66
PDLIM1O00151 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.68□□□□□ -1.66
PDLIM1O00151 RN7SL172P-201ENST00000460535 303 ntBASIC4.68□□□□□ -1.66
PDLIM1O00151 RN7SL30P-201ENST00000488416 306 ntBASIC4.68□□□□□ -1.66
PDLIM1O00151 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.68□□□□□ -1.66
PDLIM1O00151 RN7SL441P-201ENST00000492388 296 ntBASIC4.68□□□□□ -1.66
PDLIM1O00151 RPS4XP14-201ENST00000493072 781 ntBASIC4.68□□□□□ -1.66
PDLIM1O00151 AC015864.1-201ENST00000496512 544 ntBASIC4.68□□□□□ -1.66
PDLIM1O00151 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.68□□□□□ -1.66
PDLIM1O00151 AC104997.1-201ENST00000519761 717 ntBASIC4.68□□□□□ -1.66
PDLIM1O00151 AC090819.1-201ENST00000523800 1111 ntBASIC4.68□□□□□ -1.66
PDLIM1O00151 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.68□□□□□ -1.66
PDLIM1O00151 SULT1C2P2-201ENST00000562517 294 ntBASIC4.68□□□□□ -1.66
PDLIM1O00151 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.68□□□□□ -1.66
PDLIM1O00151 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.68□□□□□ -1.66
PDLIM1O00151 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.68□□□□□ -1.66
PDLIM1O00151 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.68□□□□□ -1.66
PDLIM1O00151 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.68□□□□□ -1.66
PDLIM1O00151 OR7E18P-201ENST00000592589 702 ntBASIC4.68□□□□□ -1.66
PDLIM1O00151 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM1O00151 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.68□□□□□ -1.66
PDLIM1O00151 AC023813.4-201ENST00000607580 580 ntBASIC4.68□□□□□ -1.66
PDLIM1O00151 AL592494.3-201ENST00000609485 464 ntBASIC4.68□□□□□ -1.66
PDLIM1O00151 AP005131.7-201ENST00000610087 611 ntBASIC4.68□□□□□ -1.66
PDLIM1O00151 AL645927.2-201ENST00000618350 349 ntBASIC4.68□□□□□ -1.66
PDLIM1O00151 AC105105.5-201ENST00000622635 1294 ntBASIC4.68□□□□□ -1.66
PDLIM1O00151 AC020763.5-201ENST00000623298 430 ntBASIC4.68□□□□□ -1.66
PDLIM1O00151 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.68□□□□□ -1.66
PDLIM1O00151 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.68□□□□□ -1.66
PDLIM1O00151 CYP4F35P-202ENST00000636121 390 ntBASIC4.68□□□□□ -1.66
PDLIM1O00151 AL139254.3-201ENST00000641097 674 ntBASIC4.68□□□□□ -1.66
PDLIM1O00151 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PDLIM1O00151 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PDLIM1O00151 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PDLIM1O00151 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM1O00151 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM1O00151 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.68□□□□□ -1.66
PDLIM1O00151 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM1O00151 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PDLIM1O00151 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.68□□□□□ -1.66
PDLIM1O00151 AC011266.1-201ENST00000624119 3569 ntBASIC4.68□□□□□ -1.66
PDLIM1O00151 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM1O00151 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM1O00151 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM1O00151 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM1O00151 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM1O00151 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.67□□□□□ -1.66
PDLIM1O00151 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM1O00151 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PDLIM1O00151 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.67□□□□□ -1.66
PDLIM1O00151 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM1O00151 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.67□□□□□ -1.66
PDLIM1O00151 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.67□□□□□ -1.66
PDLIM1O00151 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM1O00151 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM1O00151 SNORA66-201ENST00000384792 133 ntBASIC4.67□□□□□ -1.66
PDLIM1O00151 RPL5P19-201ENST00000404228 893 ntBASIC4.67□□□□□ -1.66
PDLIM1O00151 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
PDLIM1O00151 MTND3P20-201ENST00000407663 186 ntBASIC4.67□□□□□ -1.66
PDLIM1O00151 TXNP2-201ENST00000443918 295 ntBASIC4.67□□□□□ -1.66
PDLIM1O00151 BUD31P2-201ENST00000449374 300 ntBASIC4.67□□□□□ -1.66
PDLIM1O00151 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.67□□□□□ -1.66
PDLIM1O00151 AC104629.2-201ENST00000468627 598 ntBASIC4.67□□□□□ -1.66
PDLIM1O00151 RN7SL799P-201ENST00000475891 298 ntBASIC4.67□□□□□ -1.66
PDLIM1O00151 RN7SL222P-201ENST00000476452 299 ntBASIC4.67□□□□□ -1.66
PDLIM1O00151 AC079841.1-201ENST00000481228 950 ntBASIC4.67□□□□□ -1.66
PDLIM1O00151 AC104971.1-201ENST00000495117 578 ntBASIC4.67□□□□□ -1.66
PDLIM1O00151 AC072052.1-201ENST00000496556 306 ntBASIC4.67□□□□□ -1.66
PDLIM1O00151 AC146944.2-203ENST00000502493 354 ntBASIC4.67□□□□□ -1.66
PDLIM1O00151 RPS4XP20-201ENST00000505751 772 ntBASIC4.67□□□□□ -1.66
PDLIM1O00151 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM1O00151 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM1O00151 AC139495.1-202ENST00000513164 354 ntBASIC4.67□□□□□ -1.66
PDLIM1O00151 RNU6-362P-201ENST00000516736 90 ntBASIC4.67□□□□□ -1.66
PDLIM1O00151 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.67□□□□□ -1.66
PDLIM1O00151 OR4V1P-201ENST00000525394 1140 ntBASIC4.67□□□□□ -1.66
PDLIM1O00151 AC109635.6-201ENST00000525487 1113 ntBASIC4.67□□□□□ -1.66
PDLIM1O00151 OR4A46P-201ENST00000527255 933 ntBASIC4.67□□□□□ -1.66
PDLIM1O00151 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.67□□□□□ -1.66
PDLIM1O00151 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.67□□□□□ -1.66
PDLIM1O00151 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.67□□□□□ -1.66
PDLIM1O00151 AL512310.9-201ENST00000553311 948 ntBASIC4.67□□□□□ -1.66
PDLIM1O00151 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.67□□□□□ -1.66
PDLIM1O00151 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.67□□□□□ -1.66
PDLIM1O00151 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.67□□□□□ -1.66
PDLIM1O00151 AC107308.1-201ENST00000615897 301 ntBASIC4.67□□□□□ -1.66
PDLIM1O00151 AL133370.2-201ENST00000619934 439 ntBASIC4.67□□□□□ -1.66
PDLIM1O00151 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM1O00151 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.67□□□□□ -1.66
PDLIM1O00151 AC105074.1-201ENST00000623380 3095 ntBASIC4.67□□□□□ -1.66
PDLIM1O00151 SMG1P6-201ENST00000532337 2930 ntBASIC4.67□□□□□ -1.66
PDLIM1O00151 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.67□□□□□ -1.66
PDLIM1O00151 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM1O00151 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
PDLIM1O00151 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM1O00151 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.67□□□□□ -1.66
PDLIM1O00151 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PDLIM1O00151 AC134882.1-201ENST00000603738 1676 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms