Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 AC008814.1-201ENST00000603797 406 ntBASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 AL162431.4-201ENST00000604674 411 ntBASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 AC244107.2-201ENST00000611773 76 ntBASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 NEAT1-202ENST00000501122 22743 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 RN7SKP185-201ENST00000362813 326 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 RNA5SP505-201ENST00000364748 108 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 RN7SKP153-201ENST00000365026 316 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 OR1F12-201ENST00000402365 945 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 AL021331.1-201ENST00000402817 582 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 RNA5SP113-201ENST00000410486 84 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 EIF4A1P3-201ENST00000411521 244 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 AC105402.1-201ENST00000413336 545 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 RANP4-201ENST00000413361 655 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 RPS26P47-201ENST00000427219 348 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 AL160175.1-201ENST00000428124 247 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 MTND4LP14-201ENST00000429447 288 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 AL359265.2-201ENST00000434367 631 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 AC073465.2-201ENST00000440938 498 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 OR7E125P-201ENST00000443450 846 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 AC023271.1-201ENST00000445936 1090 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 RPL7AP52-201ENST00000458096 790 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 RNU6-1218P-201ENST00000458990 108 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 AC089999.1-201ENST00000460336 374 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 SCARNA20.4-201ENST00000516969 131 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 TOMM20P2-201ENST00000540082 421 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 AC008083.2-201ENST00000546707 476 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 AC136624.4-201ENST00000573044 370 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 AC015849.2-201ENST00000605738 409 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 AC131238.1-201ENST00000617135 328 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 AC016717.3-201ENST00000624730 554 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 AC104260.2-201ENST00000623551 3497 ntBASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA1Q9Y5H4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
PCDHGA1Q9Y5H4 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHGA1Q9Y5H4 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHGA1Q9Y5H4 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHGA1Q9Y5H4 RNA5SP223-201ENST00000365174 120 ntBASIC4.94□□□□□ -1.62
PCDHGA1Q9Y5H4 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHGA1Q9Y5H4 AC073136.2-201ENST00000417282 849 ntBASIC4.94□□□□□ -1.62
PCDHGA1Q9Y5H4 ZFAND6P1-201ENST00000434138 605 ntBASIC4.94□□□□□ -1.62
PCDHGA1Q9Y5H4 RPL7P11-201ENST00000437586 658 ntBASIC4.94□□□□□ -1.62
PCDHGA1Q9Y5H4 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDHGA1Q9Y5H4 AL137845.2-201ENST00000444292 988 ntBASIC4.94□□□□□ -1.62
PCDHGA1Q9Y5H4 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.94□□□□□ -1.62
PCDHGA1Q9Y5H4 AL354714.3-201ENST00000447284 493 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms