Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC211433.2-201ENST00000608433 387 ntBASIC4.59□□□□□ -1.67
TREX1Q9NSU2 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.59□□□□□ -1.67
TREX1Q9NSU2 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.59□□□□□ -1.67
TREX1Q9NSU2 AP003072.5-201ENST00000623872 773 ntBASIC4.59□□□□□ -1.67
TREX1Q9NSU2 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.59□□□□□ -1.67
TREX1Q9NSU2 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.59□□□□□ -1.68
TREX1Q9NSU2 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
TREX1Q9NSU2 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.68
TREX1Q9NSU2 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 CASC19-204ENST00000641001 2055 ntBASIC4.58□□□□□ -1.68
TREX1Q9NSU2 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 ZNF137P-201ENST00000456718 1920 ntBASIC4.58□□□□□ -1.68
TREX1Q9NSU2 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 UGT2B26P-201ENST00000508672 1613 ntBASIC4.58□□□□□ -1.68
TREX1Q9NSU2 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.58□□□□□ -1.68
TREX1Q9NSU2 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 RN7SKP167-201ENST00000411047 285 ntBASIC4.58□□□□□ -1.68
TREX1Q9NSU2 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 AC004448.2-201ENST00000422360 586 ntBASIC4.58□□□□□ -1.68
TREX1Q9NSU2 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 YWHAZP2-201ENST00000440317 728 ntBASIC4.58□□□□□ -1.68
TREX1Q9NSU2 ARL4AP3-201ENST00000441452 574 ntBASIC4.58□□□□□ -1.68
TREX1Q9NSU2 RPL23AP65-201ENST00000475608 468 ntBASIC4.58□□□□□ -1.68
TREX1Q9NSU2 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 AC016687.1-201ENST00000482574 353 ntBASIC4.58□□□□□ -1.68
TREX1Q9NSU2 IGLV2-34-201ENST00000490007 283 ntBASIC4.58□□□□□ -1.68
TREX1Q9NSU2 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 RNA5SP228-201ENST00000516232 133 ntBASIC4.58□□□□□ -1.68
TREX1Q9NSU2 IGKV1-32-201ENST00000519290 311 ntBASIC4.58□□□□□ -1.68
TREX1Q9NSU2 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 AC090181.2-201ENST00000602975 672 ntBASIC4.58□□□□□ -1.68
TREX1Q9NSU2 AC087468.1-201ENST00000604365 630 ntBASIC4.58□□□□□ -1.68
TREX1Q9NSU2 AC008966.2-201ENST00000606157 453 ntBASIC4.58□□□□□ -1.68
TREX1Q9NSU2 AP002360.3-201ENST00000607673 710 ntBASIC4.58□□□□□ -1.68
TREX1Q9NSU2 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 CASC19-222ENST00000641321 1173 ntBASIC4.58□□□□□ -1.68
TREX1Q9NSU2 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
TREX1Q9NSU2 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 AC104297.1-201ENST00000393779 870 ntBASIC4.57□□□□□ -1.68
TREX1Q9NSU2 AL589994.1-201ENST00000404962 340 ntBASIC4.57□□□□□ -1.68
TREX1Q9NSU2 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 CEACAMP8-201ENST00000413902 580 ntBASIC4.57□□□□□ -1.68
TREX1Q9NSU2 RAD23BP1-201ENST00000421404 1227 ntBASIC4.57□□□□□ -1.68
TREX1Q9NSU2 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 RPL12P3-201ENST00000440080 396 ntBASIC4.57□□□□□ -1.68
TREX1Q9NSU2 AC073648.4-201ENST00000442655 781 ntBASIC4.57□□□□□ -1.68
TREX1Q9NSU2 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 AC108022.1-201ENST00000493466 478 ntBASIC4.57□□□□□ -1.68
TREX1Q9NSU2 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 AC027455.1-201ENST00000574104 594 ntBASIC4.57□□□□□ -1.68
TREX1Q9NSU2 MIR4436B2-201ENST00000581415 91 ntBASIC4.57□□□□□ -1.68
TREX1Q9NSU2 MIR4436B1-201ENST00000583272 91 ntBASIC4.57□□□□□ -1.68
TREX1Q9NSU2 ADAD1P2-201ENST00000588476 646 ntBASIC4.57□□□□□ -1.68
TREX1Q9NSU2 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 AC091979.2-201ENST00000607514 214 ntBASIC4.57□□□□□ -1.68
TREX1Q9NSU2 FAM25E-202ENST00000608562 189 ntBASIC4.57□□□□□ -1.68
TREX1Q9NSU2 OR51H2P-202ENST00000641424 3046 ntBASIC4.57□□□□□ -1.68
TREX1Q9NSU2 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 AC083843.3-201ENST00000623679 2186 ntBASIC4.57□□□□□ -1.68
TREX1Q9NSU2 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.57□□□□□ -1.68
TREX1Q9NSU2 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms