Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.31□□□□□ -1.72
CHD8Q9HCK8 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CHD8Q9HCK8 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.31□□□□□ -1.72
CHD8Q9HCK8 IARS-213ENST00000627121 4587 ntTSL 5 BASIC4.31□□□□□ -1.72
CHD8Q9HCK8 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CHD8Q9HCK8 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CHD8Q9HCK8 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.31□□□□□ -1.72
CHD8Q9HCK8 AC034229.2-201ENST00000566945 2508 ntBASIC4.31□□□□□ -1.72
CHD8Q9HCK8 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHD8Q9HCK8 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CHD8Q9HCK8 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CHD8Q9HCK8 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CHD8Q9HCK8 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CHD8Q9HCK8 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CHD8Q9HCK8 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.31□□□□□ -1.72
CHD8Q9HCK8 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.31□□□□□ -1.72
CHD8Q9HCK8 BTF3P10-201ENST00000433415 495 ntBASIC4.31□□□□□ -1.72
CHD8Q9HCK8 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.31□□□□□ -1.72
CHD8Q9HCK8 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.31□□□□□ -1.72
CHD8Q9HCK8 AC073137.1-201ENST00000605636 634 ntBASIC4.31□□□□□ -1.72
CHD8Q9HCK8 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CHD8Q9HCK8 AL158152.1-201ENST00000602652 1435 ntBASIC4.31□□□□□ -1.72
CHD8Q9HCK8 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHD8Q9HCK8 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 AC007618.1-201ENST00000366455 732 ntBASIC4.3□□□□□ -1.72
CHD8Q9HCK8 U3.26-201ENST00000391236 204 ntBASIC4.3□□□□□ -1.72
CHD8Q9HCK8 U3.28-201ENST00000391249 210 ntBASIC4.3□□□□□ -1.72
CHD8Q9HCK8 ATP5F1P4-201ENST00000397288 746 ntBASIC4.3□□□□□ -1.72
CHD8Q9HCK8 CTSL3P-202ENST00000412179 788 ntBASIC4.3□□□□□ -1.72
CHD8Q9HCK8 RPL23AP38-201ENST00000423801 469 ntBASIC4.3□□□□□ -1.72
CHD8Q9HCK8 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 NOTCH2P1-201ENST00000443481 624 ntBASIC4.3□□□□□ -1.72
CHD8Q9HCK8 RPL7P33-201ENST00000444159 742 ntBASIC4.3□□□□□ -1.72
CHD8Q9HCK8 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 Y_RNA.676-201ENST00000516393 96 ntBASIC4.3□□□□□ -1.72
CHD8Q9HCK8 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 AP001160.4-201ENST00000596971 382 ntBASIC4.3□□□□□ -1.72
CHD8Q9HCK8 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 Z95331.1-201ENST00000623075 23112 ntBASIC4.3□□□□□ -1.72
CHD8Q9HCK8 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 AL137058.3-201ENST00000624531 3099 ntBASIC4.3□□□□□ -1.72
CHD8Q9HCK8 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 OR56A5-201ENST00000340110 738 ntBASIC4.3□□□□□ -1.72
CHD8Q9HCK8 RNA5SP124-201ENST00000362739 110 ntBASIC4.3□□□□□ -1.72
CHD8Q9HCK8 RNA5SP49-201ENST00000516450 115 ntBASIC4.3□□□□□ -1.72
CHD8Q9HCK8 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 AL139124.1-201ENST00000609123 421 ntBASIC4.3□□□□□ -1.72
CHD8Q9HCK8 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 MR1-209ENST00000617803 7584 ntTSL 5 BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC4.3□□□□□ -1.72
CHD8Q9HCK8 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 RNA5SP130-201ENST00000364431 114 ntBASIC4.29□□□□□ -1.72
CHD8Q9HCK8 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 USP24P1-201ENST00000433802 779 ntBASIC4.29□□□□□ -1.72
CHD8Q9HCK8 MRPL48P1-201ENST00000445390 636 ntBASIC4.29□□□□□ -1.72
CHD8Q9HCK8 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 GAPDHP36-201ENST00000480688 918 ntBASIC4.29□□□□□ -1.72
CHD8Q9HCK8 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 AC090515.3-201ENST00000560431 315 ntBASIC4.29□□□□□ -1.72
CHD8Q9HCK8 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 MIR5699-201ENST00000578903 90 ntBASIC4.29□□□□□ -1.72
CHD8Q9HCK8 MIR3945-201ENST00000581853 98 ntBASIC4.29□□□□□ -1.72
CHD8Q9HCK8 AC092354.2-201ENST00000607786 514 ntBASIC4.29□□□□□ -1.72
CHD8Q9HCK8 AL356608.1-201ENST00000610034 820 ntBASIC4.29□□□□□ -1.72
CHD8Q9HCK8 OR2L1P-202ENST00000641567 1023 ntBASIC4.29□□□□□ -1.72
CHD8Q9HCK8 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 AC004158.1-201ENST00000564508 4319 ntBASIC4.29□□□□□ -1.72
CHD8Q9HCK8 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC4.29□□□□□ -1.72
CHD8Q9HCK8 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms