Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AL035461.2-201ENST00000619201 524 ntBASIC5.67□□□□□ -1.5
CCDC33Q8N5R6 AP003497.2-201ENST00000624220 967 ntBASIC5.67□□□□□ -1.5
CCDC33Q8N5R6 U6.107-201ENST00000637108 79 ntBASIC5.67□□□□□ -1.5
CCDC33Q8N5R6 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC33Q8N5R6 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC33Q8N5R6 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC33Q8N5R6 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC33Q8N5R6 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.67□□□□□ -1.5
CCDC33Q8N5R6 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC33Q8N5R6 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC33Q8N5R6 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 GVINP1-202ENST00000531871 7271 ntBASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 RNA5SP183-201ENST00000362452 119 ntBASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 RNA5SP335-201ENST00000363817 110 ntBASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 RN7SKP6-201ENST00000364795 319 ntBASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 AL035419.1-201ENST00000397037 564 ntBASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 OR52B5P-201ENST00000435337 951 ntBASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 RPL12P3-201ENST00000440080 396 ntBASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 AC092170.1-201ENST00000440211 356 ntBASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 SNORD125-201ENST00000459538 96 ntBASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 AC020898.1-201ENST00000474167 787 ntBASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 ATP5LP5-201ENST00000483050 299 ntBASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 EIF4A2P5-201ENST00000529914 499 ntBASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 AC006518.2-201ENST00000542513 940 ntBASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 MTCYBP23-201ENST00000558717 1102 ntBASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 NPM1P47-201ENST00000560843 856 ntBASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 MIR3691-201ENST00000578066 90 ntBASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 AC112220.2-201ENST00000605513 533 ntBASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 RNU4-5P-201ENST00000607255 135 ntBASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 AL162574.1-201ENST00000615702 950 ntBASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 AC024595.1-201ENST00000623088 387 ntBASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 AC006927.4-201ENST00000639187 543 ntBASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 OR52B5P-202ENST00000641118 1110 ntBASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC33Q8N5R6 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 OR9K1P-202ENST00000641111 3217 ntBASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 MAPK10-328ENST00000641553 4009 ntBASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 AC093775.1-201ENST00000624154 1868 ntBASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 MIR585-201ENST00000384887 94 ntBASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 MIR551A-201ENST00000385042 96 ntBASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 AC246680.2-201ENST00000422106 389 ntBASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 NANOGP5-201ENST00000424456 877 ntBASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 MTND2P5-201ENST00000432656 1006 ntBASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 NDUFB4P8-201ENST00000435351 367 ntBASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 AL359265.1-201ENST00000440296 795 ntBASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 IGBP1P3-201ENST00000447449 1000 ntBASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 RPL31P44-201ENST00000447680 377 ntBASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 CBX1P2-201ENST00000453841 458 ntBASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 RPS12P31-201ENST00000491419 398 ntBASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 RPS23P1-201ENST00000491662 432 ntBASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 AC113420.1-201ENST00000507903 571 ntBASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 OR8K4P-201ENST00000534608 872 ntBASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 AC018552.1-201ENST00000562099 811 ntBASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 AC027455.1-201ENST00000574104 594 ntBASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC33Q8N5R6 MIR4660-201ENST00000583549 74 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms