Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 ZNF806-201ENST00000438300 1774 ntBASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 AL031985.3-201ENST00000565390 2449 ntBASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 CKAP2P1-201ENST00000555477 2049 ntBASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 MIR365B-201ENST00000362317 111 ntBASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 RNU6-697P-201ENST00000363348 107 ntBASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 Y_RNA.148-201ENST00000363557 117 ntBASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 RNA5SP140-201ENST00000364524 92 ntBASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 MTCYBP4-201ENST00000401524 249 ntBASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 RPL23AP28-201ENST00000448062 470 ntBASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 AL645937.3-201ENST00000453647 936 ntBASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 PPP1R2P5-201ENST00000457256 603 ntBASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 HMGN2P25-201ENST00000486956 268 ntBASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 SNX18P23-201ENST00000510867 677 ntBASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 AC104986.1-201ENST00000517978 436 ntBASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 AC105031.1-201ENST00000518550 476 ntBASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 AP003467.2-201ENST00000520175 319 ntBASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 SNRPCP6-201ENST00000528310 210 ntBASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 AC022878.1-201ENST00000530684 149 ntBASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 AC013283.1-201ENST00000557282 492 ntBASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 AC053481.3-201ENST00000577881 843 ntBASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 AC087763.1-201ENST00000603391 286 ntBASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 ATP1B3P1-201ENST00000605365 821 ntBASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 BX323046.1-201ENST00000610145 535 ntBASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 AC231657.1-201ENST00000624313 397 ntBASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.12□□□□□ -1.27
NPAS3Q8IXF0 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 AL139805.2-201ENST00000455305 2433 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 AC104581.5-201ENST00000624171 7141 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 AC117409.1-201ENST00000470499 1310 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 Y_RNA.117-201ENST00000363294 101 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 SNORD35A-201ENST00000363389 86 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 Y_RNA.552-201ENST00000384665 112 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 SNORD65.1-201ENST00000390889 71 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 RNY4P36-201ENST00000391116 96 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 RPL6P29-201ENST00000414863 865 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 AC009961.2-201ENST00000435771 251 ntBASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC7.11□□□□□ -1.27
NPAS3Q8IXF0 AC092106.2-201ENST00000436597 487 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms