Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 NPM1P22-201ENST00000427761 952 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.75□□□□□ -1.65
SHFQ7M4L6 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.75□□□□□ -1.65
SHFQ7M4L6 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.75□□□□□ -1.65
SHFQ7M4L6 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.75□□□□□ -1.65
SHFQ7M4L6 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.75□□□□□ -1.65
SHFQ7M4L6 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.75□□□□□ -1.65
SHFQ7M4L6 DNAJB5P1-201ENST00000454004 806 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 AC134050.1-201ENST00000495088 933 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 AC112673.1-201ENST00000513168 575 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 RNA5SP303-201ENST00000516192 130 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 RNU6-311P-201ENST00000516224 102 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.75□□□□□ -1.65
SHFQ7M4L6 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.75□□□□□ -1.65
SHFQ7M4L6 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.75□□□□□ -1.65
SHFQ7M4L6 AC006349.1-201ENST00000555526 235 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.75□□□□□ -1.65
SHFQ7M4L6 AC009712.1-201ENST00000564938 316 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.75□□□□□ -1.65
SHFQ7M4L6 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.75□□□□□ -1.65
SHFQ7M4L6 AC022022.2-201ENST00000602989 360 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 AC108865.2-201ENST00000606881 432 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 MIR6780B-201ENST00000610307 79 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 AL096712.1-201ENST00000614561 159 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.75□□□□□ -1.65
SHFQ7M4L6 AP000676.4-201ENST00000624659 623 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.75□□□□□ -1.65
SHFQ7M4L6 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHFQ7M4L6 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SHFQ7M4L6 OR13C1P-202ENST00000641378 2919 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
SHFQ7M4L6 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
SHFQ7M4L6 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.75□□□□□ -1.65
SHFQ7M4L6 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.75□□□□□ -1.65
SHFQ7M4L6 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHFQ7M4L6 AL355578.1-201ENST00000607405 1328 ntBASIC4.74□□□□□ -1.65
SHFQ7M4L6 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHFQ7M4L6 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHFQ7M4L6 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHFQ7M4L6 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHFQ7M4L6 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHFQ7M4L6 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHFQ7M4L6 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHFQ7M4L6 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHFQ7M4L6 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHFQ7M4L6 RNU6-236P-201ENST00000363886 106 ntBASIC4.74□□□□□ -1.65
SHFQ7M4L6 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 MIR589-201ENST00000385238 99 ntBASIC4.74□□□□□ -1.65
SHFQ7M4L6 RPL23AP59-201ENST00000399415 461 ntBASIC4.74□□□□□ -1.65
SHFQ7M4L6 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 HMGN1P20-201ENST00000411849 300 ntBASIC4.74□□□□□ -1.65
SHFQ7M4L6 BMS1P17-202ENST00000416720 316 ntBASIC4.74□□□□□ -1.65
SHFQ7M4L6 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHFQ7M4L6 OR6K4P-201ENST00000423179 955 ntBASIC4.74□□□□□ -1.65
SHFQ7M4L6 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHFQ7M4L6 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 GTF2IP3-201ENST00000433887 494 ntBASIC4.74□□□□□ -1.65
SHFQ7M4L6 GSTM5P1-201ENST00000434751 660 ntBASIC4.74□□□□□ -1.65
SHFQ7M4L6 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHFQ7M4L6 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 MTND1P31-201ENST00000449206 961 ntBASIC4.74□□□□□ -1.65
SHFQ7M4L6 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 AC092155.2-201ENST00000454675 477 ntBASIC4.74□□□□□ -1.65
SHFQ7M4L6 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHFQ7M4L6 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 AC079168.1-201ENST00000458741 345 ntBASIC4.74□□□□□ -1.65
SHFQ7M4L6 AC107015.1-201ENST00000466902 747 ntBASIC4.74□□□□□ -1.65
SHFQ7M4L6 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 RNA5SP473-201ENST00000516402 125 ntBASIC4.74□□□□□ -1.65
SHFQ7M4L6 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 MORF4L1P3-201ENST00000525966 950 ntBASIC4.74□□□□□ -1.65
SHFQ7M4L6 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 NDUFS5P6-201ENST00000529136 295 ntBASIC4.74□□□□□ -1.65
SHFQ7M4L6 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 Z99289.3-201ENST00000605586 594 ntBASIC4.74□□□□□ -1.65
SHFQ7M4L6 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHFQ7M4L6 AC009464.1-201ENST00000615731 469 ntBASIC4.74□□□□□ -1.65
SHFQ7M4L6 AC132068.1-201ENST00000623805 459 ntBASIC4.74□□□□□ -1.65
SHFQ7M4L6 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 LINC01808-202ENST00000641680 1116 ntBASIC4.74□□□□□ -1.65
SHFQ7M4L6 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
SHFQ7M4L6 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms