Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC025164.1-201ENST00000496249 478 ntBASIC4.18□□□□□ -1.74
CCDC58Q4VC31 SNRPCP2-201ENST00000504370 475 ntBASIC4.18□□□□□ -1.74
CCDC58Q4VC31 AC139783.2-201ENST00000504847 1145 ntBASIC4.18□□□□□ -1.74
CCDC58Q4VC31 AC024558.1-201ENST00000505008 528 ntBASIC4.18□□□□□ -1.74
CCDC58Q4VC31 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 AC027455.1-201ENST00000574104 594 ntBASIC4.18□□□□□ -1.74
CCDC58Q4VC31 AC008759.1-201ENST00000589783 983 ntBASIC4.18□□□□□ -1.74
CCDC58Q4VC31 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 AC126915.2-201ENST00000610957 190 ntBASIC4.18□□□□□ -1.74
CCDC58Q4VC31 AL022401.1-201ENST00000619498 108 ntBASIC4.18□□□□□ -1.74
CCDC58Q4VC31 AL359715.5-201ENST00000623431 443 ntBASIC4.18□□□□□ -1.74
CCDC58Q4VC31 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 AC027290.2-201ENST00000623210 18662 ntBASIC4.18□□□□□ -1.74
CCDC58Q4VC31 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 AL627171.1-201ENST00000618845 1308 ntBASIC4.18□□□□□ -1.74
CCDC58Q4VC31 AL136164.3-201ENST00000624429 3978 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC58Q4VC31 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC58Q4VC31 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CCDC58Q4VC31 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC58Q4VC31 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CCDC58Q4VC31 AL590762.2-201ENST00000395798 571 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 RN7SKP59-201ENST00000410520 314 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 GLUD1P9-201ENST00000420997 1173 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC58Q4VC31 AL158073.1-201ENST00000426848 1104 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 YWHAEP5-201ENST00000431545 765 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 AL353597.2-202ENST00000434901 373 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC58Q4VC31 PSMD10P3-201ENST00000437000 448 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC58Q4VC31 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 EIF2S2P4-201ENST00000461070 984 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 RN7SL205P-201ENST00000490174 284 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 AGGF1P3-201ENST00000493675 1213 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4.17□□□□□ -1.74
CCDC58Q4VC31 AK4P6-201ENST00000505168 528 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 AC112184.1-201ENST00000505179 312 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 AL592156.1-201ENST00000508758 304 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC58Q4VC31 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC58Q4VC31 IGHV3-32-201ENST00000519182 355 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 AC090151.1-201ENST00000520784 730 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 DUX4L52-201ENST00000549363 777 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 CBX3P5-201ENST00000552017 521 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 AC007424.1-203ENST00000554613 687 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC58Q4VC31 AC093249.4-201ENST00000564755 259 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC58Q4VC31 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC58Q4VC31 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC58Q4VC31 AC008966.2-201ENST00000606157 453 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 AP001521.2-201ENST00000608772 546 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 AL627230.1-201ENST00000613077 211 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 AL591926.8-201ENST00000616876 211 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 MIR1910-201ENST00000636955 80 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC58Q4VC31 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC58Q4VC31 AL031119.1-201ENST00000404707 1879 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 AC112255.1-201ENST00000624070 2493 ntBASIC4.17□□□□□ -1.74
CCDC58Q4VC31 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC58Q4VC31 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC58Q4VC31 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 RNA5SP428-201ENST00000365129 132 ntBASIC4.16□□□□□ -1.74
CCDC58Q4VC31 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 AC093719.1-202ENST00000392735 373 ntBASIC4.16□□□□□ -1.74
CCDC58Q4VC31 OR3A2-201ENST00000408891 1076 ntBASIC4.16□□□□□ -1.74
CCDC58Q4VC31 RN7SKP216-201ENST00000411050 312 ntBASIC4.16□□□□□ -1.74
CCDC58Q4VC31 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 AC114755.2-201ENST00000413520 361 ntBASIC4.16□□□□□ -1.74
CCDC58Q4VC31 GTF2IP5-201ENST00000414608 731 ntBASIC4.16□□□□□ -1.74
CCDC58Q4VC31 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 RPL12P43-201ENST00000420608 499 ntBASIC4.16□□□□□ -1.74
CCDC58Q4VC31 MTND2P11-201ENST00000423638 648 ntBASIC4.16□□□□□ -1.74
CCDC58Q4VC31 RPS26P47-201ENST00000427219 348 ntBASIC4.16□□□□□ -1.74
CCDC58Q4VC31 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC58Q4VC31 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms