Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC008897.1-201ENST00000494006 347 ntBASIC4.36□□□□□ -1.71
RFX4Q33E94 AC025164.1-201ENST00000496249 478 ntBASIC4.36□□□□□ -1.71
RFX4Q33E94 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.36□□□□□ -1.71
RFX4Q33E94 RNU4-18P-201ENST00000516751 149 ntBASIC4.36□□□□□ -1.71
RFX4Q33E94 AC008676.3-201ENST00000521237 435 ntBASIC4.36□□□□□ -1.71
RFX4Q33E94 AC025857.1-201ENST00000525252 377 ntBASIC4.36□□□□□ -1.71
RFX4Q33E94 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RFX4Q33E94 AC025423.2-201ENST00000537570 439 ntBASIC4.36□□□□□ -1.71
RFX4Q33E94 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.36□□□□□ -1.71
RFX4Q33E94 OR11J2P-201ENST00000555298 907 ntBASIC4.36□□□□□ -1.71
RFX4Q33E94 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.36□□□□□ -1.71
RFX4Q33E94 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.36□□□□□ -1.71
RFX4Q33E94 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.36□□□□□ -1.71
RFX4Q33E94 AC091178.1-203ENST00000584586 279 ntBASIC4.36□□□□□ -1.71
RFX4Q33E94 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.36□□□□□ -1.71
RFX4Q33E94 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
RFX4Q33E94 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.36□□□□□ -1.71
RFX4Q33E94 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.36□□□□□ -1.71
RFX4Q33E94 AC015813.4-201ENST00000610469 179 ntBASIC4.36□□□□□ -1.71
RFX4Q33E94 AC022467.1-201ENST00000614738 749 ntBASIC4.36□□□□□ -1.71
RFX4Q33E94 AC023509.5-201ENST00000617434 807 ntBASIC4.36□□□□□ -1.71
RFX4Q33E94 AL022401.1-201ENST00000619498 108 ntBASIC4.36□□□□□ -1.71
RFX4Q33E94 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.36□□□□□ -1.71
RFX4Q33E94 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.36□□□□□ -1.71
RFX4Q33E94 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.36□□□□□ -1.71
RFX4Q33E94 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.36□□□□□ -1.71
RFX4Q33E94 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RFX4Q33E94 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.36□□□□□ -1.71
RFX4Q33E94 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RFX4Q33E94 AL450326.2-201ENST00000421913 1962 ntBASIC4.36□□□□□ -1.71
RFX4Q33E94 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RFX4Q33E94 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RFX4Q33E94 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RFX4Q33E94 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RFX4Q33E94 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
RFX4Q33E94 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFX4Q33E94 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFX4Q33E94 AC105074.1-201ENST00000623380 3095 ntBASIC4.35□□□□□ -1.71
RFX4Q33E94 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.35□□□□□ -1.71
RFX4Q33E94 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.35□□□□□ -1.71
RFX4Q33E94 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RFX4Q33E94 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
RFX4Q33E94 RNA5SP22-201ENST00000365393 109 ntBASIC4.35□□□□□ -1.71
RFX4Q33E94 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.35□□□□□ -1.71
RFX4Q33E94 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFX4Q33E94 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFX4Q33E94 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RFX4Q33E94 RPL21P43-201ENST00000425440 472 ntBASIC4.35□□□□□ -1.71
RFX4Q33E94 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RFX4Q33E94 RHOT1P3-201ENST00000436571 331 ntBASIC4.35□□□□□ -1.71
RFX4Q33E94 AC069285.2-201ENST00000440210 275 ntBASIC4.35□□□□□ -1.71
RFX4Q33E94 CNOT7P2-201ENST00000441051 832 ntBASIC4.35□□□□□ -1.71
RFX4Q33E94 AURKAPS1-201ENST00000451805 1212 ntBASIC4.35□□□□□ -1.71
RFX4Q33E94 OR7L1P-201ENST00000456181 380 ntBASIC4.35□□□□□ -1.71
RFX4Q33E94 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.35□□□□□ -1.71
RFX4Q33E94 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.35□□□□□ -1.71
RFX4Q33E94 HIGD1AP14-201ENST00000507617 282 ntBASIC4.35□□□□□ -1.71
RFX4Q33E94 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.35□□□□□ -1.71
RFX4Q33E94 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFX4Q33E94 AL121839.1-201ENST00000556233 1185 ntBASIC4.35□□□□□ -1.71
RFX4Q33E94 AP005119.2-201ENST00000579735 1105 ntBASIC4.35□□□□□ -1.71
RFX4Q33E94 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.35□□□□□ -1.71
RFX4Q33E94 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.35□□□□□ -1.71
RFX4Q33E94 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.35□□□□□ -1.71
RFX4Q33E94 AL158196.1-201ENST00000616786 434 ntBASIC4.35□□□□□ -1.71
RFX4Q33E94 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
RFX4Q33E94 AP002967.1-201ENST00000624203 539 ntBASIC4.35□□□□□ -1.71
RFX4Q33E94 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.35□□□□□ -1.71
RFX4Q33E94 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RFX4Q33E94 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.35□□□□□ -1.71
RFX4Q33E94 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFX4Q33E94 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.35□□□□□ -1.71
RFX4Q33E94 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.35□□□□□ -1.71
RFX4Q33E94 AL031119.1-201ENST00000404707 1879 ntBASIC4.35□□□□□ -1.71
RFX4Q33E94 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RFX4Q33E94 AC018529.3-201ENST00000624212 2254 ntBASIC4.34□□□□□ -1.71
RFX4Q33E94 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RFX4Q33E94 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RFX4Q33E94 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.34□□□□□ -1.71
RFX4Q33E94 RN7SKP115-201ENST00000363177 317 ntBASIC4.34□□□□□ -1.71
RFX4Q33E94 AL590762.2-201ENST00000395798 571 ntBASIC4.34□□□□□ -1.71
RFX4Q33E94 RPL5P19-201ENST00000404228 893 ntBASIC4.34□□□□□ -1.71
RFX4Q33E94 RNA5SP104-201ENST00000410989 118 ntBASIC4.34□□□□□ -1.71
RFX4Q33E94 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RFX4Q33E94 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RFX4Q33E94 AL691447.1-201ENST00000419456 387 ntBASIC4.34□□□□□ -1.71
RFX4Q33E94 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.34□□□□□ -1.71
RFX4Q33E94 SKP1P3-201ENST00000429280 487 ntBASIC4.34□□□□□ -1.71
RFX4Q33E94 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.34□□□□□ -1.71
RFX4Q33E94 UBE2V2P1-201ENST00000434717 398 ntBASIC4.34□□□□□ -1.71
RFX4Q33E94 AP000936.3-201ENST00000438127 255 ntBASIC4.34□□□□□ -1.71
RFX4Q33E94 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.34□□□□□ -1.71
RFX4Q33E94 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.34□□□□□ -1.71
RFX4Q33E94 AC010469.1-201ENST00000463864 576 ntBASIC4.34□□□□□ -1.71
RFX4Q33E94 RPL5P30-201ENST00000465511 891 ntBASIC4.34□□□□□ -1.71
RFX4Q33E94 SEPT7P6-201ENST00000469999 1143 ntBASIC4.34□□□□□ -1.71
RFX4Q33E94 RPS18P6-201ENST00000476880 458 ntBASIC4.34□□□□□ -1.71
RFX4Q33E94 AC006499.6-201ENST00000511169 607 ntBASIC4.34□□□□□ -1.71
RFX4Q33E94 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.34□□□□□ -1.71
RFX4Q33E94 AC015795.1-201ENST00000513669 327 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms