Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CKS1BP61024 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.39□□□□□ -1.87
CKS1BP61024 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CKS1BP61024 USP8-204ENST00000425032 3559 ntTSL 2 BASIC3.39□□□□□ -1.87
CKS1BP61024 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.39□□□□□ -1.87
CKS1BP61024 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CKS1BP61024 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.39□□□□□ -1.87
CKS1BP61024 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CKS1BP61024 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CKS1BP61024 RNA5SP510-201ENST00000364697 99 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 SNORD6-201ENST00000365444 73 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CKS1BP61024 SNORA2.3-201ENST00000383920 135 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 AL592291.1-201ENST00000403830 352 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CKS1BP61024 RNU6ATAC18P-201ENST00000408413 101 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 AL596448.1-201ENST00000415024 392 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC3.39□□□□□ -1.87
CKS1BP61024 AL159169.1-201ENST00000421119 127 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC3.39□□□□□ -1.87
CKS1BP61024 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.39□□□□□ -1.87
CKS1BP61024 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC3.39□□□□□ -1.87
CKS1BP61024 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.39□□□□□ -1.87
CKS1BP61024 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC3.39□□□□□ -1.87
CKS1BP61024 RPL36AP39-201ENST00000445859 318 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 RN7SL168P-201ENST00000463821 279 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 RPL23AP71-201ENST00000470966 469 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CKS1BP61024 AC005412.2-201ENST00000492004 341 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 RN7SL441P-201ENST00000492388 296 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 AC092349.1-201ENST00000504903 310 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 PPBPP1-201ENST00000510807 373 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 KCTD9P2-201ENST00000512203 1013 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 AC008802.1-201ENST00000519121 791 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 IGKV2-4-201ENST00000523070 340 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC3.39□□□□□ -1.87
CKS1BP61024 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC3.39□□□□□ -1.87
CKS1BP61024 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CKS1BP61024 AC024405.1-201ENST00000532521 1042 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC3.39□□□□□ -1.87
CKS1BP61024 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC3.39□□□□□ -1.87
CKS1BP61024 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CKS1BP61024 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.39□□□□□ -1.87
CKS1BP61024 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CKS1BP61024 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CKS1BP61024 MIR744-201ENST00000578242 98 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 MIR4271-201ENST00000582451 67 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 SLC25A36P1-201ENST00000590111 465 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC3.39□□□□□ -1.87
CKS1BP61024 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.39□□□□□ -1.87
CKS1BP61024 AC010245.2-201ENST00000606908 1167 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.39□□□□□ -1.87
CKS1BP61024 AC012531.5-201ENST00000611375 151 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 MIR6071-201ENST00000616741 78 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 AC234782.5-201ENST00000617723 324 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 AC004232.3-201ENST00000622977 525 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 MTCO1P1-201ENST00000624263 1081 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.39□□□□□ -1.87
CKS1BP61024 HSPA8P1-201ENST00000425843 1833 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CKS1BP61024 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CKS1BP61024 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CKS1BP61024 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CKS1BP61024 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CKS1BP61024 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CKS1BP61024 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC3.38□□□□□ -1.87
CKS1BP61024 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CKS1BP61024 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.38□□□□□ -1.87
CKS1BP61024 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC3.38□□□□□ -1.87
CKS1BP61024 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CKS1BP61024 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CKS1BP61024 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CKS1BP61024 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CKS1BP61024 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CKS1BP61024 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.38□□□□□ -1.87
CKS1BP61024 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CKS1BP61024 RNA5SP335-201ENST00000363817 110 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 U3.15-201ENST00000365398 212 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 RN7SKP187-201ENST00000365536 330 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 AL353625.1-202ENST00000366273 571 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 SSX3-202ENST00000376893 800 ntTSL 2 BASIC3.38□□□□□ -1.87
CKS1BP61024 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CKS1BP61024 VN1R12P-201ENST00000403778 876 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 OR4K12P-201ENST00000406538 961 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 U3.32-201ENST00000408116 212 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC3.38□□□□□ -1.87
CKS1BP61024 PTP4A1P5-201ENST00000420305 455 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC3.38□□□□□ -1.87
CKS1BP61024 RPL7P4-203ENST00000430239 730 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 AC092162.1-201ENST00000432828 434 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CKS1BP61024 CYCSP6-201ENST00000434498 302 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 CEACAMP1-201ENST00000434624 1035 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.38□□□□□ -1.87
CKS1BP61024 AL353093.1-201ENST00000441292 436 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 PCNPP2-201ENST00000441651 455 ntBASIC3.38□□□□□ -1.87
CKS1BP61024 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CKS1BP61024 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC3.38□□□□□ -1.87
CKS1BP61024 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.38□□□□□ -1.87
CKS1BP61024 VN1R96P-201ENST00000446052 858 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms