Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 AP003461.1-201ENST00000528866 78 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AC024940.3-201ENST00000538551 316 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 BICD1-206ENST00000551086 423 ntTSL 3 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AC011611.5-201ENST00000552477 578 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AC008015.1-201ENST00000555505 465 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AC026826.3-201ENST00000561747 158 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AC114947.2-201ENST00000565748 2125 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AC135628.1-201ENST00000568867 534 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 GARSP1-201ENST00000570895 719 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AL078601.3-201ENST00000573303 535 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AC103987.3-201ENST00000582071 292 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AL589765.6-201ENST00000601909 549 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AL583856.2-201ENST00000606298 543 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AC025175.1-201ENST00000606482 759 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AC016877.3-201ENST00000606778 504 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AC009237.15-201ENST00000610252 501 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 MTND4P4-201ENST00000439033 1366 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AC017007.4-201ENST00000503353 1352 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 NXF4-202ENST00000416098 1465 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC007996.1-201ENST00000620414 2821 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 RPL11P4-201ENST00000332269 436 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 Y_RNA.201-201ENST00000364052 96 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 RNA5SP241-201ENST00000391326 114 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC233289.1-201ENST00000403700 508 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 SNORA11.3-201ENST00000408471 128 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC010385.1-201ENST00000412374 256 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 TIMM9P2-201ENST00000419324 266 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 RPF2P1-201ENST00000424137 906 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 RPS4XP16-201ENST00000427198 791 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 HIGD1AP12-201ENST00000427832 281 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 PCBP2P1-201ENST00000437262 977 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 Z84478.1-201ENST00000438230 1219 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC073465.2-201ENST00000440938 498 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 FGF7P5-201ENST00000441829 291 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 RPS7P3-201ENST00000443360 580 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 HSFY3P-201ENST00000444242 1191 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 ZNF619P1-201ENST00000446539 752 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC104978.1-201ENST00000449387 391 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 OR51B8P-201ENST00000449892 769 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC011225.1-201ENST00000457751 369 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AL591473.1-201ENST00000464297 313 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC104339.1-201ENST00000465478 348 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC008629.2-201ENST00000503783 483 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC084824.1-201ENST00000550917 1005 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC090695.1-201ENST00000561269 1222 ntBASIC4.34□□□□□ -1.71
ERVFC1-1P60608 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms