Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC6.52□□□□□ -1.37
RTP1P59025 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC6.52□□□□□ -1.37
RTP1P59025 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC6.52□□□□□ -1.37
RTP1P59025 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.52□□□□□ -1.37
RTP1P59025 CCNG2P1-201ENST00000549521 1000 ntBASIC6.52□□□□□ -1.37
RTP1P59025 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.52□□□□□ -1.37
RTP1P59025 CASC16-202ENST00000563844 610 ntTSL 3 BASIC6.52□□□□□ -1.37
RTP1P59025 AC015720.2-201ENST00000567709 334 ntBASIC6.52□□□□□ -1.37
RTP1P59025 MIR4420-201ENST00000583944 77 ntBASIC6.52□□□□□ -1.37
RTP1P59025 AC006115.2-201ENST00000596823 202 ntBASIC6.52□□□□□ -1.37
RTP1P59025 AP000403.1-201ENST00000603349 851 ntBASIC6.52□□□□□ -1.37
RTP1P59025 SUGT1P3-202ENST00000604259 383 ntBASIC6.52□□□□□ -1.37
RTP1P59025 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC6.52□□□□□ -1.37
RTP1P59025 AC015922.4-201ENST00000612568 690 ntBASIC6.52□□□□□ -1.37
RTP1P59025 VN1R74P-201ENST00000613259 503 ntBASIC6.52□□□□□ -1.37
RTP1P59025 AC107075.1-201ENST00000613695 314 ntBASIC6.52□□□□□ -1.37
RTP1P59025 U1.25-201ENST00000614085 162 ntBASIC6.52□□□□□ -1.37
RTP1P59025 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RTP1P59025 U1.34-201ENST00000618578 162 ntBASIC6.52□□□□□ -1.37
RTP1P59025 RMST_5.1-201ENST00000618704 126 ntBASIC6.52□□□□□ -1.37
RTP1P59025 U1.31-201ENST00000620022 160 ntBASIC6.52□□□□□ -1.37
RTP1P59025 AC068870.2-201ENST00000620635 389 ntBASIC6.52□□□□□ -1.37
RTP1P59025 AC009878.1-201ENST00000621819 340 ntBASIC6.52□□□□□ -1.37
RTP1P59025 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
RTP1P59025 AC139426.3-201ENST00000605648 2059 ntBASIC6.52□□□□□ -1.37
RTP1P59025 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RTP1P59025 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC6.52□□□□□ -1.37
RTP1P59025 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.52□□□□□ -1.37
RTP1P59025 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RTP1P59025 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RTP1P59025 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
RTP1P59025 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
RTP1P59025 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RTP1P59025 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.51□□□□□ -1.37
RTP1P59025 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
RTP1P59025 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RTP1P59025 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
RTP1P59025 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RTP1P59025 AC114786.1-201ENST00000512892 1415 ntBASIC6.51□□□□□ -1.37
RTP1P59025 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RTP1P59025 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RTP1P59025 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.51□□□□□ -1.37
RTP1P59025 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.51□□□□□ -1.37
RTP1P59025 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RTP1P59025 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RTP1P59025 NACA3P-201ENST00000359690 648 ntBASIC6.51□□□□□ -1.37
RTP1P59025 RNU6-1283P-201ENST00000365314 105 ntBASIC6.51□□□□□ -1.37
RTP1P59025 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RTP1P59025 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
RTP1P59025 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RTP1P59025 Y_RNA.560-201ENST00000384689 102 ntBASIC6.51□□□□□ -1.37
RTP1P59025 SNORA40.2-201ENST00000390847 128 ntBASIC6.51□□□□□ -1.37
RTP1P59025 SNORD65-201ENST00000391079 73 ntBASIC6.51□□□□□ -1.37
RTP1P59025 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC6.51□□□□□ -1.37
RTP1P59025 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.51□□□□□ -1.37
RTP1P59025 AL590762.4-201ENST00000425885 253 ntBASIC6.51□□□□□ -1.37
RTP1P59025 DPPA2P1-201ENST00000428060 556 ntBASIC6.51□□□□□ -1.37
RTP1P59025 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC6.51□□□□□ -1.37
RTP1P59025 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC6.51□□□□□ -1.37
RTP1P59025 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.51□□□□□ -1.37
RTP1P59025 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.51□□□□□ -1.37
RTP1P59025 AC007327.1-201ENST00000447461 264 ntBASIC6.51□□□□□ -1.37
RTP1P59025 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC6.51□□□□□ -1.37
RTP1P59025 OR52E3P-201ENST00000452083 936 ntBASIC6.51□□□□□ -1.37
RTP1P59025 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.51□□□□□ -1.37
RTP1P59025 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.51□□□□□ -1.37
RTP1P59025 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC6.51□□□□□ -1.37
RTP1P59025 RPL35AP28-201ENST00000459730 331 ntBASIC6.51□□□□□ -1.37
RTP1P59025 RPL30P6-201ENST00000475925 342 ntBASIC6.51□□□□□ -1.37
RTP1P59025 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.51□□□□□ -1.37
RTP1P59025 RPL7P39-201ENST00000481157 744 ntBASIC6.51□□□□□ -1.37
RTP1P59025 RPL38P3-201ENST00000484463 213 ntBASIC6.51□□□□□ -1.37
RTP1P59025 AC011825.1-201ENST00000484967 388 ntBASIC6.51□□□□□ -1.37
RTP1P59025 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.51□□□□□ -1.37
RTP1P59025 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.51□□□□□ -1.37
RTP1P59025 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.51□□□□□ -1.37
RTP1P59025 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC6.51□□□□□ -1.37
RTP1P59025 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RTP1P59025 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.51□□□□□ -1.37
RTP1P59025 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC6.51□□□□□ -1.37
RTP1P59025 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC6.51□□□□□ -1.37
RTP1P59025 SUMO2P14-201ENST00000604488 293 ntBASIC6.51□□□□□ -1.37
RTP1P59025 AC108747.1-201ENST00000609508 535 ntBASIC6.51□□□□□ -1.37
RTP1P59025 AC004223.4-201ENST00000612426 332 ntBASIC6.51□□□□□ -1.37
RTP1P59025 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RTP1P59025 AC024595.1-201ENST00000623088 387 ntBASIC6.51□□□□□ -1.37
RTP1P59025 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.51□□□□□ -1.37
RTP1P59025 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.51□□□□□ -1.37
RTP1P59025 AC244258.1-201ENST00000637553 1071 ntBASIC6.51□□□□□ -1.37
RTP1P59025 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
RTP1P59025 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RTP1P59025 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
RTP1P59025 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
RTP1P59025 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RTP1P59025 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RTP1P59025 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
RTP1P59025 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RTP1P59025 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.51□□□□□ -1.37
RTP1P59025 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
RTP1P59025 AL158152.1-201ENST00000602652 1435 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms