Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
GFRA1P56159 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA1P56159 RNA5SP279-201ENST00000365513 117 ntBASIC5.74□□□□□ -1.49
GFRA1P56159 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
GFRA1P56159 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA1P56159 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
GFRA1P56159 HMGN1P14-201ENST00000412459 517 ntBASIC5.74□□□□□ -1.49
GFRA1P56159 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA1P56159 OFD1P18Y-201ENST00000420889 959 ntBASIC5.74□□□□□ -1.49
GFRA1P56159 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.74□□□□□ -1.49
GFRA1P56159 AC094019.1-201ENST00000434678 472 ntBASIC5.74□□□□□ -1.49
GFRA1P56159 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC5.74□□□□□ -1.49
GFRA1P56159 UBE2V1P8-201ENST00000437166 265 ntBASIC5.74□□□□□ -1.49
GFRA1P56159 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.74□□□□□ -1.49
GFRA1P56159 AC002504.1-201ENST00000438281 691 ntBASIC5.74□□□□□ -1.49
GFRA1P56159 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.74□□□□□ -1.49
GFRA1P56159 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.74□□□□□ -1.49
GFRA1P56159 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.74□□□□□ -1.49
GFRA1P56159 CXCR2P1-202ENST00000443392 1074 ntBASIC5.74□□□□□ -1.49
GFRA1P56159 NANOGNBP1-201ENST00000448444 480 ntBASIC5.74□□□□□ -1.49
GFRA1P56159 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.74□□□□□ -1.49
GFRA1P56159 AC005229.2-201ENST00000456995 399 ntBASIC5.74□□□□□ -1.49
GFRA1P56159 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.74□□□□□ -1.49
GFRA1P56159 SNORD42A-201ENST00000459584 64 ntBASIC5.74□□□□□ -1.49
GFRA1P56159 AC104339.1-201ENST00000465478 348 ntBASIC5.74□□□□□ -1.49
GFRA1P56159 RN7SL369P-201ENST00000477138 299 ntBASIC5.74□□□□□ -1.49
GFRA1P56159 AC004924.1-201ENST00000480160 781 ntBASIC5.74□□□□□ -1.49
GFRA1P56159 UBA52P3-201ENST00000491303 382 ntBASIC5.74□□□□□ -1.49
GFRA1P56159 AL358832.1-201ENST00000497800 389 ntBASIC5.74□□□□□ -1.49
GFRA1P56159 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.74□□□□□ -1.49
GFRA1P56159 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.74□□□□□ -1.49
GFRA1P56159 EIF3KP3-201ENST00000514461 639 ntBASIC5.74□□□□□ -1.49
GFRA1P56159 RNA5SP441-201ENST00000516809 88 ntBASIC5.74□□□□□ -1.49
GFRA1P56159 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.74□□□□□ -1.49
GFRA1P56159 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
GFRA1P56159 TPRKBP2-201ENST00000565969 475 ntBASIC5.74□□□□□ -1.49
GFRA1P56159 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.74□□□□□ -1.49
GFRA1P56159 AC017100.2-201ENST00000584628 355 ntBASIC5.74□□□□□ -1.49
GFRA1P56159 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.74□□□□□ -1.49
GFRA1P56159 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.74□□□□□ -1.49
GFRA1P56159 AC005332.4-201ENST00000592752 579 ntBASIC5.74□□□□□ -1.49
GFRA1P56159 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.74□□□□□ -1.49
GFRA1P56159 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.74□□□□□ -1.49
GFRA1P56159 AC109347.2-201ENST00000610220 349 ntBASIC5.74□□□□□ -1.49
GFRA1P56159 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA1P56159 AC027807.2-201ENST00000616099 408 ntBASIC5.74□□□□□ -1.49
GFRA1P56159 MIR6721-201ENST00000617181 87 ntBASIC5.74□□□□□ -1.49
GFRA1P56159 AL139089.1-201ENST00000620372 975 ntBASIC5.74□□□□□ -1.49
GFRA1P56159 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.74□□□□□ -1.49
GFRA1P56159 OR5AK4P-201ENST00000635912 903 ntBASIC5.74□□□□□ -1.49
GFRA1P56159 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
GFRA1P56159 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA1P56159 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA1P56159 MTND5P26-201ENST00000426018 1752 ntBASIC5.74□□□□□ -1.49
GFRA1P56159 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA1P56159 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.74□□□□□ -1.49
GFRA1P56159 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA1P56159 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.74□□□□□ -1.49
GFRA1P56159 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA1P56159 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA1P56159 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.74□□□□□ -1.49
GFRA1P56159 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.74□□□□□ -1.49
GFRA1P56159 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA1P56159 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA1P56159 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.74□□□□□ -1.49
GFRA1P56159 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA1P56159 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
GFRA1P56159 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
GFRA1P56159 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
GFRA1P56159 AC062029.1-202ENST00000606164 3651 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
GFRA1P56159 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
GFRA1P56159 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
GFRA1P56159 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
GFRA1P56159 AC016745.2-201ENST00000608834 3443 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
GFRA1P56159 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
GFRA1P56159 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.73□□□□□ -1.49
GFRA1P56159 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
GFRA1P56159 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
GFRA1P56159 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
GFRA1P56159 FUNDC2P3-201ENST00000334716 533 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 RNU6-251P-201ENST00000363235 104 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 RNU1-65P-201ENST00000363919 148 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
GFRA1P56159 RPS24P12-201ENST00000402084 394 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 RPS21P8-201ENST00000413365 247 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 AL035422.1-201ENST00000414193 397 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
GFRA1P56159 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.73□□□□□ -1.49
GFRA1P56159 Z97055.1-201ENST00000419730 712 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 AC007394.1-201ENST00000421941 531 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.73□□□□□ -1.49
GFRA1P56159 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.73□□□□□ -1.49
GFRA1P56159 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.73□□□□□ -1.49
GFRA1P56159 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
GFRA1P56159 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.73□□□□□ -1.49
GFRA1P56159 HSPD1P12-201ENST00000429127 1069 ntBASIC5.73□□□□□ -1.49
GFRA1P56159 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.73□□□□□ -1.49
GFRA1P56159 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms