Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AL365181.4-201ENST00000609800 547 ntBASIC5.24□□□□□ -1.57
SUMO3P55854 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SUMO3P55854 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.24□□□□□ -1.57
SUMO3P55854 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.24□□□□□ -1.57
SUMO3P55854 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.24□□□□□ -1.57
SUMO3P55854 AC022400.9-201ENST00000623633 273 ntBASIC5.24□□□□□ -1.57
SUMO3P55854 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.24□□□□□ -1.57
SUMO3P55854 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
SUMO3P55854 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SUMO3P55854 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SUMO3P55854 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.24□□□□□ -1.57
SUMO3P55854 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SUMO3P55854 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SUMO3P55854 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SUMO3P55854 LINC01963-201ENST00000562038 3148 ntBASIC5.24□□□□□ -1.57
SUMO3P55854 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
SUMO3P55854 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SUMO3P55854 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
SUMO3P55854 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
SUMO3P55854 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.24□□□□□ -1.57
SUMO3P55854 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
SUMO3P55854 AC009962.1-201ENST00000567327 3813 ntBASIC5.24□□□□□ -1.57
SUMO3P55854 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SUMO3P55854 AC232271.1-201ENST00000602455 2715 ntBASIC5.24□□□□□ -1.57
SUMO3P55854 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
SUMO3P55854 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SUMO3P55854 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SUMO3P55854 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
SUMO3P55854 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.23□□□□□ -1.57
SUMO3P55854 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.23□□□□□ -1.57
SUMO3P55854 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.23□□□□□ -1.57
SUMO3P55854 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SUMO3P55854 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SUMO3P55854 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SUMO3P55854 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SUMO3P55854 RNU1-136P-201ENST00000384181 164 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 RNU6-1151P-201ENST00000384684 107 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 MIR130A-201ENST00000385274 89 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SUMO3P55854 RNU6-1300P-201ENST00000391046 108 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SUMO3P55854 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 OR2W4P-201ENST00000406496 926 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 RNA5SP80-201ENST00000410475 111 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 AL450992.3-201ENST00000413192 568 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 RPL6P29-201ENST00000414863 865 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 AL365338.1-201ENST00000422282 858 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.23□□□□□ -1.57
SUMO3P55854 AC115283.1-201ENST00000427353 400 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 AL365396.1-201ENST00000430854 671 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 RPS26P40-201ENST00000435209 294 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.23□□□□□ -1.57
SUMO3P55854 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.23□□□□□ -1.57
SUMO3P55854 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.23□□□□□ -1.57
SUMO3P55854 AC004865.1-201ENST00000442276 1003 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 RPL5P10-201ENST00000445207 894 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 AP006222.1-205ENST00000450734 457 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 AL445665.1-202ENST00000452436 324 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 RPL12P39-201ENST00000455456 496 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.23□□□□□ -1.57
SUMO3P55854 snoU13.29-201ENST00000459370 104 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 NDUFA5P5-201ENST00000468361 342 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 BET1P1-201ENST00000482276 359 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 RPL5P23-201ENST00000496040 868 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 AC073358.1-201ENST00000505671 684 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.23□□□□□ -1.57
SUMO3P55854 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.23□□□□□ -1.57
SUMO3P55854 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.23□□□□□ -1.57
SUMO3P55854 SNORA81.2-201ENST00000516868 170 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 SCARNA6.1-201ENST00000516989 238 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 AC139365.2-201ENST00000517972 253 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 MTCO1P47-201ENST00000523889 1271 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.23□□□□□ -1.57
SUMO3P55854 AP003080.1-202ENST00000526526 915 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.23□□□□□ -1.57
SUMO3P55854 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.23□□□□□ -1.57
SUMO3P55854 AC096996.1-201ENST00000563813 325 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 AC002400.1-201ENST00000569310 726 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 AC091488.1-201ENST00000604239 660 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 AC090246.1-201ENST00000616499 426 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 MIR1910-201ENST00000636955 80 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.23□□□□□ -1.57
SUMO3P55854 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.23□□□□□ -1.57
SUMO3P55854 AP000776.1-201ENST00000530032 1663 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SUMO3P55854 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.23□□□□□ -1.57
SUMO3P55854 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.23□□□□□ -1.57
SUMO3P55854 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
SUMO3P55854 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SUMO3P55854 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SUMO3P55854 BRAFP1-201ENST00000445336 2703 ntBASIC5.23□□□□□ -1.57
SUMO3P55854 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SUMO3P55854 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SUMO3P55854 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.23□□□□□ -1.57
SUMO3P55854 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SUMO3P55854 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.22□□□□□ -1.57
SUMO3P55854 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SUMO3P55854 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SUMO3P55854 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms