Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CDH13P55290 CASC19-264ENST00000641912 1184 ntBASIC4.89□□□□□ -1.63
CDH13P55290 AC010329.2-201ENST00000595195 2737 ntBASIC4.89□□□□□ -1.63
CDH13P55290 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH13P55290 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.89□□□□□ -1.63
CDH13P55290 AC092079.1-201ENST00000558620 1985 ntBASIC4.89□□□□□ -1.63
CDH13P55290 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.89□□□□□ -1.63
CDH13P55290 AL672167.1-205ENST00000641112 3080 ntBASIC4.88□□□□□ -1.63
CDH13P55290 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDH13P55290 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH13P55290 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH13P55290 AL592494.2-201ENST00000425455 1548 ntBASIC4.88□□□□□ -1.63
CDH13P55290 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.88□□□□□ -1.63
CDH13P55290 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH13P55290 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CDH13P55290 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH13P55290 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CDH13P55290 HMGB1P13-201ENST00000406019 642 ntBASIC4.88□□□□□ -1.63
CDH13P55290 OR3A2-201ENST00000408891 1076 ntBASIC4.88□□□□□ -1.63
CDH13P55290 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CDH13P55290 RN7SKP126-201ENST00000411143 300 ntBASIC4.88□□□□□ -1.63
CDH13P55290 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH13P55290 AL158825.1-201ENST00000414735 521 ntBASIC4.88□□□□□ -1.63
CDH13P55290 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.88□□□□□ -1.63
CDH13P55290 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH13P55290 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.88□□□□□ -1.63
CDH13P55290 CASP3P1-201ENST00000446037 609 ntBASIC4.88□□□□□ -1.63
CDH13P55290 AC092685.1-201ENST00000447960 1243 ntBASIC4.88□□□□□ -1.63
CDH13P55290 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH13P55290 RPS17P2-201ENST00000461663 408 ntBASIC4.88□□□□□ -1.63
CDH13P55290 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH13P55290 AL591473.1-201ENST00000464297 313 ntBASIC4.88□□□□□ -1.63
CDH13P55290 RN7SL799P-201ENST00000475891 298 ntBASIC4.88□□□□□ -1.63
CDH13P55290 RPL21P6-201ENST00000479171 504 ntBASIC4.88□□□□□ -1.63
CDH13P55290 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH13P55290 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH13P55290 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH13P55290 AC108471.1-201ENST00000513977 287 ntBASIC4.88□□□□□ -1.63
CDH13P55290 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH13P55290 AL671862.1-201ENST00000515851 349 ntBASIC4.88□□□□□ -1.63
CDH13P55290 RNA5SP249-201ENST00000516127 99 ntBASIC4.88□□□□□ -1.63
CDH13P55290 RNA5SP303-201ENST00000516192 130 ntBASIC4.88□□□□□ -1.63
CDH13P55290 AC027308.1-201ENST00000517993 110 ntBASIC4.88□□□□□ -1.63
CDH13P55290 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH13P55290 OR4A46P-201ENST00000527255 933 ntBASIC4.88□□□□□ -1.63
CDH13P55290 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH13P55290 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH13P55290 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDH13P55290 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH13P55290 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH13P55290 AC011374.2-201ENST00000607135 526 ntBASIC4.88□□□□□ -1.63
CDH13P55290 AL391834.1-201ENST00000609609 560 ntBASIC4.88□□□□□ -1.63
CDH13P55290 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.88□□□□□ -1.63
CDH13P55290 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH13P55290 AC022106.2-201ENST00000620114 757 ntBASIC4.88□□□□□ -1.63
CDH13P55290 AP000943.4-201ENST00000622912 357 ntBASIC4.88□□□□□ -1.63
CDH13P55290 AP002505.2-201ENST00000623585 696 ntBASIC4.88□□□□□ -1.63
CDH13P55290 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH13P55290 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH13P55290 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.88□□□□□ -1.63
CDH13P55290 AC008432.1-201ENST00000615912 1320 ntBASIC4.88□□□□□ -1.63
CDH13P55290 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDH13P55290 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CDH13P55290 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDH13P55290 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH13P55290 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH13P55290 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH13P55290 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH13P55290 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH13P55290 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CDH13P55290 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH13P55290 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CDH13P55290 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CDH13P55290 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CDH13P55290 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
CDH13P55290 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH13P55290 MIR16-2-201ENST00000362117 81 ntBASIC4.87□□□□□ -1.63
CDH13P55290 SNORA63.3-201ENST00000362682 132 ntBASIC4.87□□□□□ -1.63
CDH13P55290 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH13P55290 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH13P55290 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH13P55290 SNORA11.3-201ENST00000408471 128 ntBASIC4.87□□□□□ -1.63
CDH13P55290 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.87□□□□□ -1.63
CDH13P55290 GTF3AP1-201ENST00000416942 1004 ntBASIC4.87□□□□□ -1.63
CDH13P55290 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH13P55290 PNRC2P1-201ENST00000423940 420 ntBASIC4.87□□□□□ -1.63
CDH13P55290 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH13P55290 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH13P55290 AL121776.1-201ENST00000429337 372 ntBASIC4.87□□□□□ -1.63
CDH13P55290 AL389925.1-201ENST00000432257 728 ntBASIC4.87□□□□□ -1.63
CDH13P55290 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.87□□□□□ -1.63
CDH13P55290 OR52B5P-201ENST00000435337 951 ntBASIC4.87□□□□□ -1.63
CDH13P55290 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH13P55290 RPS29P9-201ENST00000440360 171 ntBASIC4.87□□□□□ -1.63
CDH13P55290 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CDH13P55290 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.87□□□□□ -1.63
CDH13P55290 TCEA1P1-201ENST00000449716 880 ntBASIC4.87□□□□□ -1.63
CDH13P55290 CYCSP42-201ENST00000450823 238 ntBASIC4.87□□□□□ -1.63
CDH13P55290 AC092647.2-201ENST00000452998 253 ntBASIC4.87□□□□□ -1.63
CDH13P55290 AC011225.1-201ENST00000457751 369 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 162.1 ms