Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.15□□□□□ -1.59
LIMK1P53667 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.15□□□□□ -1.59
LIMK1P53667 TRGV6-201ENST00000417928 299 ntBASIC5.15□□□□□ -1.59
LIMK1P53667 MTCO3P21-201ENST00000430791 643 ntBASIC5.15□□□□□ -1.59
LIMK1P53667 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.15□□□□□ -1.59
LIMK1P53667 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.15□□□□□ -1.59
LIMK1P53667 RPL7AP52-201ENST00000458096 790 ntBASIC5.15□□□□□ -1.59
LIMK1P53667 snoU13.1-201ENST00000459157 104 ntBASIC5.15□□□□□ -1.59
LIMK1P53667 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.15□□□□□ -1.59
LIMK1P53667 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LIMK1P53667 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.15□□□□□ -1.59
LIMK1P53667 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.15□□□□□ -1.59
LIMK1P53667 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.15□□□□□ -1.59
LIMK1P53667 CKS1BP1-201ENST00000555221 240 ntBASIC5.15□□□□□ -1.59
LIMK1P53667 AC068446.3-201ENST00000555285 382 ntBASIC5.15□□□□□ -1.59
LIMK1P53667 AP005403.1-201ENST00000579720 229 ntBASIC5.15□□□□□ -1.59
LIMK1P53667 MIR3667-201ENST00000581025 74 ntBASIC5.15□□□□□ -1.59
LIMK1P53667 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.15□□□□□ -1.59
LIMK1P53667 MIR7853-201ENST00000584820 132 ntBASIC5.15□□□□□ -1.59
LIMK1P53667 BNIP3P22-201ENST00000593399 556 ntBASIC5.15□□□□□ -1.59
LIMK1P53667 BNIP3P33-201ENST00000598912 569 ntBASIC5.15□□□□□ -1.59
LIMK1P53667 AL391358.1-201ENST00000605342 190 ntBASIC5.15□□□□□ -1.59
LIMK1P53667 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.15□□□□□ -1.59
LIMK1P53667 BMS1P21-201ENST00000634565 365 ntBASIC5.15□□□□□ -1.59
LIMK1P53667 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.15□□□□□ -1.59
LIMK1P53667 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.15□□□□□ -1.59
LIMK1P53667 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LIMK1P53667 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
LIMK1P53667 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.15□□□□□ -1.59
LIMK1P53667 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LIMK1P53667 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.15□□□□□ -1.59
LIMK1P53667 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.15□□□□□ -1.59
LIMK1P53667 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LIMK1P53667 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LIMK1P53667 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.14□□□□□ -1.59
LIMK1P53667 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.14□□□□□ -1.59
LIMK1P53667 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
LIMK1P53667 CASC19-204ENST00000641001 2055 ntBASIC5.14□□□□□ -1.59
LIMK1P53667 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.14□□□□□ -1.59
LIMK1P53667 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LIMK1P53667 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.14□□□□□ -1.59
LIMK1P53667 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LIMK1P53667 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LIMK1P53667 AC092747.4-201ENST00000620519 1861 ntBASIC5.14□□□□□ -1.59
LIMK1P53667 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
LIMK1P53667 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
LIMK1P53667 RN7SKP74-201ENST00000362849 309 ntBASIC5.14□□□□□ -1.59
LIMK1P53667 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
LIMK1P53667 HSPA8P15-201ENST00000401676 786 ntBASIC5.14□□□□□ -1.59
LIMK1P53667 Z97832.1-201ENST00000402490 328 ntBASIC5.14□□□□□ -1.59
LIMK1P53667 MIR1182-201ENST00000408363 97 ntBASIC5.14□□□□□ -1.59
LIMK1P53667 RPS4XP16-201ENST00000427198 791 ntBASIC5.14□□□□□ -1.59
LIMK1P53667 CNOT7P1-201ENST00000429006 852 ntBASIC5.14□□□□□ -1.59
LIMK1P53667 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.14□□□□□ -1.59
LIMK1P53667 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.14□□□□□ -1.59
LIMK1P53667 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.14□□□□□ -1.59
LIMK1P53667 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.14□□□□□ -1.59
LIMK1P53667 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.14□□□□□ -1.59
LIMK1P53667 AC063943.1-201ENST00000465434 453 ntBASIC5.14□□□□□ -1.59
LIMK1P53667 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.14□□□□□ -1.59
LIMK1P53667 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.14□□□□□ -1.59
LIMK1P53667 AC012400.1-201ENST00000518452 381 ntBASIC5.14□□□□□ -1.59
LIMK1P53667 AC009643.1-201ENST00000532030 391 ntBASIC5.14□□□□□ -1.59
LIMK1P53667 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.14□□□□□ -1.59
LIMK1P53667 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
LIMK1P53667 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
LIMK1P53667 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LIMK1P53667 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LIMK1P53667 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.14□□□□□ -1.59
LIMK1P53667 AC005242.1-201ENST00000585658 438 ntBASIC5.14□□□□□ -1.59
LIMK1P53667 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.14□□□□□ -1.59
LIMK1P53667 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.14□□□□□ -1.59
LIMK1P53667 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.14□□□□□ -1.59
LIMK1P53667 AC005252.1-201ENST00000604518 1063 ntBASIC5.14□□□□□ -1.59
LIMK1P53667 AL162431.4-201ENST00000604674 411 ntBASIC5.14□□□□□ -1.59
LIMK1P53667 CR589904.2-201ENST00000612533 440 ntBASIC5.14□□□□□ -1.59
LIMK1P53667 AL627230.1-201ENST00000613077 211 ntBASIC5.14□□□□□ -1.59
LIMK1P53667 AL591926.8-201ENST00000616876 211 ntBASIC5.14□□□□□ -1.59
LIMK1P53667 AC073592.7-201ENST00000623659 507 ntBASIC5.14□□□□□ -1.59
LIMK1P53667 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LIMK1P53667 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
LIMK1P53667 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.14□□□□□ -1.59
LIMK1P53667 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LIMK1P53667 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.14□□□□□ -1.59
LIMK1P53667 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.14□□□□□ -1.59
LIMK1P53667 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
LIMK1P53667 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.14□□□□□ -1.59
LIMK1P53667 AC114546.3-201ENST00000623582 1734 ntBASIC5.14□□□□□ -1.59
LIMK1P53667 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.14□□□□□ -1.59
LIMK1P53667 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LIMK1P53667 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.14□□□□□ -1.59
LIMK1P53667 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LIMK1P53667 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.13□□□□□ -1.59
LIMK1P53667 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
LIMK1P53667 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
LIMK1P53667 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LIMK1P53667 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LIMK1P53667 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LIMK1P53667 U3.3-201ENST00000362986 216 ntBASIC5.13□□□□□ -1.59
LIMK1P53667 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms