Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.49□□□□□ -1.53
NUP98P52948 NMNAT1P2-201ENST00000435192 860 ntBASIC5.49□□□□□ -1.53
NUP98P52948 UBE2V1P3-201ENST00000439651 417 ntBASIC5.49□□□□□ -1.53
NUP98P52948 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.49□□□□□ -1.53
NUP98P52948 AC020593.1-201ENST00000507399 299 ntBASIC5.49□□□□□ -1.53
NUP98P52948 NPM1P41-201ENST00000512920 831 ntBASIC5.49□□□□□ -1.53
NUP98P52948 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.49□□□□□ -1.53
NUP98P52948 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP98P52948 AC093227.2-201ENST00000589357 285 ntBASIC5.49□□□□□ -1.53
NUP98P52948 AC022916.3-201ENST00000592961 742 ntBASIC5.49□□□□□ -1.53
NUP98P52948 AC245389.2-201ENST00000616023 576 ntBASIC5.49□□□□□ -1.53
NUP98P52948 AC242843.1-201ENST00000618702 573 ntBASIC5.49□□□□□ -1.53
NUP98P52948 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NUP98P52948 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NUP98P52948 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
NUP98P52948 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
NUP98P52948 AC104260.2-201ENST00000623551 3497 ntBASIC5.49□□□□□ -1.53
NUP98P52948 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
NUP98P52948 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
NUP98P52948 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NUP98P52948 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.49□□□□□ -1.53
NUP98P52948 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.48□□□□□ -1.53
NUP98P52948 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.48□□□□□ -1.53
NUP98P52948 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NUP98P52948 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
NUP98P52948 FCF1P5-201ENST00000406490 482 ntBASIC5.48□□□□□ -1.53
NUP98P52948 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.48□□□□□ -1.53
NUP98P52948 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.48□□□□□ -1.53
NUP98P52948 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.48□□□□□ -1.53
NUP98P52948 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.48□□□□□ -1.53
NUP98P52948 AC007537.2-201ENST00000472093 511 ntBASIC5.48□□□□□ -1.53
NUP98P52948 RN7SL604P-201ENST00000492589 296 ntBASIC5.48□□□□□ -1.53
NUP98P52948 AC091178.1-203ENST00000584586 279 ntBASIC5.48□□□□□ -1.53
NUP98P52948 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.48□□□□□ -1.53
NUP98P52948 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.48□□□□□ -1.53
NUP98P52948 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NUP98P52948 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.48□□□□□ -1.53
NUP98P52948 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
NUP98P52948 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NUP98P52948 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NUP98P52948 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NUP98P52948 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.48□□□□□ -1.53
NUP98P52948 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NUP98P52948 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
NUP98P52948 TET1P1-201ENST00000426627 2301 ntBASIC5.48□□□□□ -1.53
NUP98P52948 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.48□□□□□ -1.53
NUP98P52948 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NUP98P52948 RNU1-14P-201ENST00000362759 152 ntBASIC5.48□□□□□ -1.53
NUP98P52948 RNU1-64P-201ENST00000365443 163 ntBASIC5.48□□□□□ -1.53
NUP98P52948 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.48□□□□□ -1.53
NUP98P52948 COX6B1P7-201ENST00000430845 235 ntBASIC5.48□□□□□ -1.53
NUP98P52948 RNA5SP246-201ENST00000458909 119 ntBASIC5.48□□□□□ -1.53
NUP98P52948 AC069304.1-201ENST00000491593 704 ntBASIC5.48□□□□□ -1.53
NUP98P52948 AC093815.1-201ENST00000508637 280 ntBASIC5.48□□□□□ -1.53
NUP98P52948 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.48□□□□□ -1.53
NUP98P52948 AP003730.1-201ENST00000524605 285 ntBASIC5.48□□□□□ -1.53
NUP98P52948 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.48□□□□□ -1.53
NUP98P52948 AC023043.4-201ENST00000612081 449 ntBASIC5.48□□□□□ -1.53
NUP98P52948 AL445363.3-201ENST00000623080 671 ntBASIC5.48□□□□□ -1.53
NUP98P52948 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NUP98P52948 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
NUP98P52948 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUP98P52948 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUP98P52948 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUP98P52948 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.47□□□□□ -1.53
NUP98P52948 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUP98P52948 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.47□□□□□ -1.53
NUP98P52948 CASC19-255ENST00000641733 1385 ntBASIC5.47□□□□□ -1.53
NUP98P52948 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUP98P52948 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUP98P52948 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUP98P52948 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.47□□□□□ -1.53
NUP98P52948 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUP98P52948 TBCAP1-201ENST00000436520 327 ntBASIC5.47□□□□□ -1.53
NUP98P52948 AC128716.1-201ENST00000475129 166 ntBASIC5.47□□□□□ -1.53
NUP98P52948 RN7SL812P-201ENST00000493791 279 ntBASIC5.47□□□□□ -1.53
NUP98P52948 AC010374.1-201ENST00000503762 1237 ntBASIC5.47□□□□□ -1.53
NUP98P52948 AC108064.1-201ENST00000513791 460 ntBASIC5.47□□□□□ -1.53
NUP98P52948 RNA5SP519-201ENST00000516480 119 ntBASIC5.47□□□□□ -1.53
NUP98P52948 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.47□□□□□ -1.53
NUP98P52948 AL359219.2-201ENST00000555184 348 ntBASIC5.47□□□□□ -1.53
NUP98P52948 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.47□□□□□ -1.53
NUP98P52948 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUP98P52948 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUP98P52948 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.47□□□□□ -1.53
NUP98P52948 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
NUP98P52948 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
NUP98P52948 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.47□□□□□ -1.53
NUP98P52948 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUP98P52948 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NUP98P52948 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
NUP98P52948 NXPH1-205ENST00000602349 1953 ntBASIC5.47□□□□□ -1.53
NUP98P52948 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.47□□□□□ -1.53
NUP98P52948 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NUP98P52948 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.46□□□□□ -1.53
NUP98P52948 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
NUP98P52948 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.53
NUP98P52948 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
NUP98P52948 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
NUP98P52948 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.46□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms