Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.85□□□□□ -1.63
SOX2P48431 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
SOX2P48431 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.85□□□□□ -1.63
SOX2P48431 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.85□□□□□ -1.63
SOX2P48431 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SOX2P48431 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.85□□□□□ -1.63
SOX2P48431 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SOX2P48431 PDCL2P2-201ENST00000533651 189 ntBASIC4.85□□□□□ -1.63
SOX2P48431 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.85□□□□□ -1.63
SOX2P48431 AC010198.2-201ENST00000550612 259 ntBASIC4.85□□□□□ -1.63
SOX2P48431 AC087465.1-201ENST00000560574 245 ntBASIC4.85□□□□□ -1.63
SOX2P48431 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC4.85□□□□□ -1.63
SOX2P48431 AC002519.2-203ENST00000567043 837 ntBASIC4.85□□□□□ -1.63
SOX2P48431 MIR4311-201ENST00000580794 100 ntBASIC4.85□□□□□ -1.63
SOX2P48431 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.85□□□□□ -1.63
SOX2P48431 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.85□□□□□ -1.63
SOX2P48431 AC068790.7-201ENST00000602347 528 ntBASIC4.85□□□□□ -1.63
SOX2P48431 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.85□□□□□ -1.63
SOX2P48431 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.85□□□□□ -1.63
SOX2P48431 AL022161.1-201ENST00000604390 213 ntBASIC4.85□□□□□ -1.63
SOX2P48431 AC121247.2-201ENST00000604776 136 ntBASIC4.85□□□□□ -1.63
SOX2P48431 AP000238.1-201ENST00000608759 426 ntBASIC4.85□□□□□ -1.63
SOX2P48431 AC067852.7-201ENST00000623270 535 ntBASIC4.85□□□□□ -1.63
SOX2P48431 AP000676.3-201ENST00000623299 569 ntBASIC4.85□□□□□ -1.63
SOX2P48431 AC087821.2-201ENST00000637086 450 ntBASIC4.85□□□□□ -1.63
SOX2P48431 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.85□□□□□ -1.63
SOX2P48431 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
SOX2P48431 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SOX2P48431 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SOX2P48431 AP000473.2-201ENST00000602659 1537 ntBASIC4.85□□□□□ -1.63
SOX2P48431 AC120338.1-201ENST00000625074 1541 ntBASIC4.85□□□□□ -1.63
SOX2P48431 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.85□□□□□ -1.63
SOX2P48431 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.85□□□□□ -1.63
SOX2P48431 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
SOX2P48431 AC093311.1-201ENST00000506586 2021 ntBASIC4.85□□□□□ -1.63
SOX2P48431 AL078621.3-201ENST00000623707 2042 ntBASIC4.85□□□□□ -1.63
SOX2P48431 AC093849.1-201ENST00000563631 2209 ntBASIC4.85□□□□□ -1.63
SOX2P48431 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SOX2P48431 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SOX2P48431 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.85□□□□□ -1.63
SOX2P48431 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SOX2P48431 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
SOX2P48431 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SOX2P48431 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SOX2P48431 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SOX2P48431 OR9K1P-202ENST00000641111 3217 ntBASIC4.84□□□□□ -1.63
SOX2P48431 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SOX2P48431 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.84□□□□□ -1.63
SOX2P48431 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
SOX2P48431 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SOX2P48431 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
SOX2P48431 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.84□□□□□ -1.63
SOX2P48431 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SOX2P48431 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.84□□□□□ -1.63
SOX2P48431 CASC19-206ENST00000641028 1430 ntBASIC4.84□□□□□ -1.63
SOX2P48431 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SOX2P48431 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SOX2P48431 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SOX2P48431 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.84□□□□□ -1.63
SOX2P48431 RN7SKP250-201ENST00000363924 321 ntBASIC4.84□□□□□ -1.63
SOX2P48431 RNA5SP30-201ENST00000365552 115 ntBASIC4.84□□□□□ -1.63
SOX2P48431 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.84□□□□□ -1.63
SOX2P48431 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SOX2P48431 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.84□□□□□ -1.63
SOX2P48431 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.84□□□□□ -1.63
SOX2P48431 SNORD116-1-201ENST00000384335 95 ntBASIC4.84□□□□□ -1.63
SOX2P48431 RNA5SP241-201ENST00000391326 114 ntBASIC4.84□□□□□ -1.63
SOX2P48431 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SOX2P48431 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
SOX2P48431 MIR1302-8-201ENST00000408342 128 ntBASIC4.84□□□□□ -1.63
SOX2P48431 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.84□□□□□ -1.63
SOX2P48431 TNPO1P1-201ENST00000423641 1138 ntBASIC4.84□□□□□ -1.63
SOX2P48431 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.84□□□□□ -1.63
SOX2P48431 AL136231.1-201ENST00000429407 730 ntBASIC4.84□□□□□ -1.63
SOX2P48431 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.84□□□□□ -1.63
SOX2P48431 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC4.84□□□□□ -1.63
SOX2P48431 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SOX2P48431 RHEBP2-201ENST00000450289 600 ntBASIC4.84□□□□□ -1.63
SOX2P48431 KF459542.1-201ENST00000450908 553 ntBASIC4.84□□□□□ -1.63
SOX2P48431 DNAJC19P8-201ENST00000452887 259 ntBASIC4.84□□□□□ -1.63
SOX2P48431 AL133477.1-201ENST00000457472 514 ntBASIC4.84□□□□□ -1.63
SOX2P48431 AC009963.3-201ENST00000458090 486 ntBASIC4.84□□□□□ -1.63
SOX2P48431 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.84□□□□□ -1.63
SOX2P48431 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.84□□□□□ -1.63
SOX2P48431 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.84□□□□□ -1.63
SOX2P48431 RPF2P2-201ENST00000504693 896 ntBASIC4.84□□□□□ -1.63
SOX2P48431 AC091912.1-201ENST00000511351 248 ntBASIC4.84□□□□□ -1.63
SOX2P48431 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC4.84□□□□□ -1.63
SOX2P48431 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.84□□□□□ -1.63
SOX2P48431 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.84□□□□□ -1.63
SOX2P48431 AC023632.1-201ENST00000518463 375 ntBASIC4.84□□□□□ -1.63
SOX2P48431 IGKV2D-10-201ENST00000520194 281 ntBASIC4.84□□□□□ -1.63
SOX2P48431 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.84□□□□□ -1.63
SOX2P48431 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.84□□□□□ -1.63
SOX2P48431 HMGN2P36-201ENST00000529541 409 ntBASIC4.84□□□□□ -1.63
SOX2P48431 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.84□□□□□ -1.63
SOX2P48431 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC4.84□□□□□ -1.63
SOX2P48431 NBEAP1-201ENST00000554452 979 ntBASIC4.84□□□□□ -1.63
SOX2P48431 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SOX2P48431 AL359219.2-201ENST00000555184 348 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms