Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRT20P35900 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.06□□□□□ -1.6
KRT20P35900 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.06□□□□□ -1.6
KRT20P35900 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
KRT20P35900 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRT20P35900 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRT20P35900 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRT20P35900 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRT20P35900 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRT20P35900 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.06□□□□□ -1.6
KRT20P35900 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRT20P35900 Y_RNA.110-201ENST00000363220 99 ntBASIC5.06□□□□□ -1.6
KRT20P35900 SNORD56.4-201ENST00000363883 71 ntBASIC5.06□□□□□ -1.6
KRT20P35900 AC007618.1-201ENST00000366455 732 ntBASIC5.06□□□□□ -1.6
KRT20P35900 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRT20P35900 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.06□□□□□ -1.6
KRT20P35900 MIR143-201ENST00000385300 106 ntBASIC5.06□□□□□ -1.6
KRT20P35900 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
KRT20P35900 RPL21P67-201ENST00000402896 478 ntBASIC5.06□□□□□ -1.6
KRT20P35900 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.06□□□□□ -1.6
KRT20P35900 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.06□□□□□ -1.6
KRT20P35900 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.06□□□□□ -1.6
KRT20P35900 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRT20P35900 OR5AW1P-201ENST00000426334 1006 ntBASIC5.06□□□□□ -1.6
KRT20P35900 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
KRT20P35900 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.06□□□□□ -1.6
KRT20P35900 HSPD1P12-201ENST00000429127 1069 ntBASIC5.06□□□□□ -1.6
KRT20P35900 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRT20P35900 ARL4AP4-201ENST00000434170 518 ntBASIC5.06□□□□□ -1.6
KRT20P35900 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.06□□□□□ -1.6
KRT20P35900 AC019185.1-201ENST00000442718 389 ntBASIC5.06□□□□□ -1.6
KRT20P35900 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRT20P35900 AL672138.1-201ENST00000450604 1015 ntBASIC5.06□□□□□ -1.6
KRT20P35900 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.06□□□□□ -1.6
KRT20P35900 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.06□□□□□ -1.6
KRT20P35900 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRT20P35900 AC021660.1-201ENST00000465006 554 ntBASIC5.06□□□□□ -1.6
KRT20P35900 AC100832.1-201ENST00000471945 383 ntBASIC5.06□□□□□ -1.6
KRT20P35900 RN7SL174P-201ENST00000475578 289 ntBASIC5.06□□□□□ -1.6
KRT20P35900 RPL21P47-201ENST00000483696 477 ntBASIC5.06□□□□□ -1.6
KRT20P35900 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.06□□□□□ -1.6
KRT20P35900 MYL12BP2-201ENST00000503948 512 ntBASIC5.06□□□□□ -1.6
KRT20P35900 AC109464.1-201ENST00000511091 819 ntBASIC5.06□□□□□ -1.6
KRT20P35900 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.06□□□□□ -1.6
KRT20P35900 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.06□□□□□ -1.6
KRT20P35900 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.06□□□□□ -1.6
KRT20P35900 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.06□□□□□ -1.6
KRT20P35900 CDC42P3-201ENST00000518493 633 ntBASIC5.06□□□□□ -1.6
KRT20P35900 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.06□□□□□ -1.6
KRT20P35900 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.06□□□□□ -1.6
KRT20P35900 AC083923.1-201ENST00000523708 376 ntBASIC5.06□□□□□ -1.6
KRT20P35900 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.06□□□□□ -1.6
KRT20P35900 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.06□□□□□ -1.6
KRT20P35900 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
KRT20P35900 OR8G3P-201ENST00000533406 921 ntBASIC5.06□□□□□ -1.6
KRT20P35900 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.06□□□□□ -1.6
KRT20P35900 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
KRT20P35900 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.06□□□□□ -1.6
KRT20P35900 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.06□□□□□ -1.6
KRT20P35900 AL136520.1-202ENST00000555494 763 ntBASIC5.06□□□□□ -1.6
KRT20P35900 AC006349.1-201ENST00000555526 235 ntBASIC5.06□□□□□ -1.6
KRT20P35900 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.06□□□□□ -1.6
KRT20P35900 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.06□□□□□ -1.6
KRT20P35900 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.06□□□□□ -1.6
KRT20P35900 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRT20P35900 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.06□□□□□ -1.6
KRT20P35900 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRT20P35900 AP006248.2-201ENST00000623309 592 ntBASIC5.06□□□□□ -1.6
KRT20P35900 MIR4302-201ENST00000638058 60 ntBASIC5.06□□□□□ -1.6
KRT20P35900 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
KRT20P35900 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.06□□□□□ -1.6
KRT20P35900 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRT20P35900 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
KRT20P35900 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRT20P35900 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRT20P35900 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KRT20P35900 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRT20P35900 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRT20P35900 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRT20P35900 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KRT20P35900 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
KRT20P35900 AC091046.3-201ENST00000631455 1574 ntBASIC5.05□□□□□ -1.6
KRT20P35900 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRT20P35900 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
KRT20P35900 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.05□□□□□ -1.6
KRT20P35900 ENSAP3-201ENST00000312710 333 ntBASIC5.05□□□□□ -1.6
KRT20P35900 RNA5SP27-201ENST00000363839 119 ntBASIC5.05□□□□□ -1.6
KRT20P35900 RNA5SP242-201ENST00000364171 118 ntBASIC5.05□□□□□ -1.6
KRT20P35900 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.05□□□□□ -1.6
KRT20P35900 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KRT20P35900 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.05□□□□□ -1.6
KRT20P35900 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRT20P35900 AC092745.2-202ENST00000411880 369 ntBASIC5.05□□□□□ -1.6
KRT20P35900 RPL12P9-201ENST00000412942 488 ntBASIC5.05□□□□□ -1.6
KRT20P35900 COX5BP7-201ENST00000414780 274 ntBASIC5.05□□□□□ -1.6
KRT20P35900 AC019070.1-201ENST00000415008 1024 ntBASIC5.05□□□□□ -1.6
KRT20P35900 RPL19P16-201ENST00000433839 588 ntBASIC5.05□□□□□ -1.6
KRT20P35900 AC023347.2-201ENST00000433994 462 ntBASIC5.05□□□□□ -1.6
KRT20P35900 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.05□□□□□ -1.6
KRT20P35900 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms