Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RXRBP28702 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.38□□□□□ -1.23
RXRBP28702 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RXRBP28702 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC7.38□□□□□ -1.23
RXRBP28702 AC062029.1-202ENST00000606164 3651 ntBASIC7.38□□□□□ -1.23
RXRBP28702 USP8-204ENST00000425032 3559 ntTSL 2 BASIC7.38□□□□□ -1.23
RXRBP28702 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RXRBP28702 AC008957.3-201ENST00000624112 2242 ntBASIC7.37□□□□□ -1.23
RXRBP28702 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RXRBP28702 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
RXRBP28702 AC017002.4-201ENST00000604721 1525 ntBASIC7.37□□□□□ -1.23
RXRBP28702 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
RXRBP28702 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RXRBP28702 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RXRBP28702 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RXRBP28702 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RXRBP28702 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RXRBP28702 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RXRBP28702 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RXRBP28702 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.37□□□□□ -1.23
RXRBP28702 RPS3AP24-201ENST00000407896 734 ntBASIC7.37□□□□□ -1.23
RXRBP28702 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.37□□□□□ -1.23
RXRBP28702 DPRXP1-201ENST00000426312 460 ntBASIC7.37□□□□□ -1.23
RXRBP28702 BMS1P19-201ENST00000433925 393 ntBASIC7.37□□□□□ -1.23
RXRBP28702 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RXRBP28702 AC068135.1-201ENST00000446164 246 ntBASIC7.37□□□□□ -1.23
RXRBP28702 OR52E3P-201ENST00000452083 936 ntBASIC7.37□□□□□ -1.23
RXRBP28702 RPS27AP3-201ENST00000453803 454 ntBASIC7.37□□□□□ -1.23
RXRBP28702 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RXRBP28702 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC7.37□□□□□ -1.23
RXRBP28702 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC7.37□□□□□ -1.23
RXRBP28702 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC7.37□□□□□ -1.23
RXRBP28702 EIF3KP3-201ENST00000514461 639 ntBASIC7.37□□□□□ -1.23
RXRBP28702 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC7.37□□□□□ -1.23
RXRBP28702 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC7.37□□□□□ -1.23
RXRBP28702 AC090695.1-201ENST00000561269 1222 ntBASIC7.37□□□□□ -1.23
RXRBP28702 AC009117.1-201ENST00000563948 554 ntBASIC7.37□□□□□ -1.23
RXRBP28702 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
RXRBP28702 MRPS21P9-201ENST00000571150 257 ntBASIC7.37□□□□□ -1.23
RXRBP28702 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC7.37□□□□□ -1.23
RXRBP28702 SLC25A36P1-201ENST00000590111 465 ntBASIC7.37□□□□□ -1.23
RXRBP28702 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC7.37□□□□□ -1.23
RXRBP28702 AC025449.1-201ENST00000603896 529 ntBASIC7.37□□□□□ -1.23
RXRBP28702 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC7.37□□□□□ -1.23
RXRBP28702 FRG1HP-204ENST00000617940 757 ntBASIC7.37□□□□□ -1.23
RXRBP28702 AL161637.1-201ENST00000622380 412 ntBASIC7.37□□□□□ -1.23
RXRBP28702 CLCA3P-203ENST00000490028 2781 ntBASIC7.37□□□□□ -1.23
RXRBP28702 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RXRBP28702 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
RXRBP28702 MROH3P-201ENST00000435735 2676 ntBASIC7.37□□□□□ -1.23
RXRBP28702 IRF5P1-201ENST00000504852 2164 ntBASIC7.37□□□□□ -1.23
RXRBP28702 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RXRBP28702 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
RXRBP28702 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RXRBP28702 MFSD8-219ENST00000641228 2559 ntBASIC7.37□□□□□ -1.23
RXRBP28702 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
RXRBP28702 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RXRBP28702 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.37□□□□□ -1.23
RXRBP28702 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RXRBP28702 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RXRBP28702 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
RXRBP28702 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.37□□□□□ -1.23
RXRBP28702 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.36□□□□□ -1.23
RXRBP28702 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RXRBP28702 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
RXRBP28702 AL158152.1-201ENST00000602652 1435 ntBASIC7.36□□□□□ -1.23
RXRBP28702 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RXRBP28702 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.36□□□□□ -1.23
RXRBP28702 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RXRBP28702 MTND4P23-201ENST00000447723 1363 ntBASIC7.36□□□□□ -1.23
RXRBP28702 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RXRBP28702 Y_RNA.41-201ENST00000362646 102 ntBASIC7.36□□□□□ -1.23
RXRBP28702 RNU2-16P-201ENST00000410712 136 ntBASIC7.36□□□□□ -1.23
RXRBP28702 GJA6P-201ENST00000415117 1042 ntBASIC7.36□□□□□ -1.23
RXRBP28702 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC7.36□□□□□ -1.23
RXRBP28702 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC7.36□□□□□ -1.23
RXRBP28702 AC004690.1-201ENST00000418216 328 ntBASIC7.36□□□□□ -1.23
RXRBP28702 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC7.36□□□□□ -1.23
RXRBP28702 AL049610.1-201ENST00000423374 372 ntBASIC7.36□□□□□ -1.23
RXRBP28702 OFD1P13Y-201ENST00000431179 1232 ntBASIC7.36□□□□□ -1.23
RXRBP28702 CCNB1IP1P2-201ENST00000432876 818 ntBASIC7.36□□□□□ -1.23
RXRBP28702 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC7.36□□□□□ -1.23
RXRBP28702 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC7.36□□□□□ -1.23
RXRBP28702 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC7.36□□□□□ -1.23
RXRBP28702 MTCO1P19-201ENST00000443487 500 ntBASIC7.36□□□□□ -1.23
RXRBP28702 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.36□□□□□ -1.23
RXRBP28702 snoU13.1-201ENST00000459157 104 ntBASIC7.36□□□□□ -1.23
RXRBP28702 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC7.36□□□□□ -1.23
RXRBP28702 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC7.36□□□□□ -1.23
RXRBP28702 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC7.36□□□□□ -1.23
RXRBP28702 IGHV1-14-201ENST00000523391 241 ntBASIC7.36□□□□□ -1.23
RXRBP28702 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
RXRBP28702 ADI1P3-201ENST00000549509 470 ntBASIC7.36□□□□□ -1.23
RXRBP28702 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC7.36□□□□□ -1.23
RXRBP28702 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC7.36□□□□□ -1.23
RXRBP28702 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC7.36□□□□□ -1.23
RXRBP28702 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RXRBP28702 AC090286.3-201ENST00000573133 187 ntBASIC7.36□□□□□ -1.23
RXRBP28702 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC7.36□□□□□ -1.23
RXRBP28702 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms