Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 CCT8P1-201ENST00000413611 1657 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 AC025809.2-201ENST00000625085 1802 ntBASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 RNU6-316P-201ENST00000391027 107 ntBASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 ZSCAN12P1-201ENST00000406489 419 ntBASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 RPS15AP30-201ENST00000420976 390 ntBASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 AL109913.1-201ENST00000421173 514 ntBASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 GTF2IP23-201ENST00000423746 351 ntBASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 GTF3AP5-201ENST00000442645 697 ntBASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 RAB11AP1-201ENST00000442978 646 ntBASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 USP9YP29-201ENST00000445112 563 ntBASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 EEF1E1P1-201ENST00000446998 430 ntBASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 AC104687.1-201ENST00000485829 412 ntBASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 AC083795.1-201ENST00000491760 320 ntBASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 AC104090.1-201ENST00000506341 1171 ntBASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 NPM1P6-201ENST00000521088 871 ntBASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 RNU4ATAC-201ENST00000580972 127 ntBASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 FGF7P1-201ENST00000582820 288 ntBASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 BNIP3P26-201ENST00000600827 554 ntBASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 AC091805.2-201ENST00000603848 235 ntBASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 SUMO2P15-201ENST00000604285 278 ntBASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 AC139493.1-201ENST00000604368 397 ntBASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 NDUFA8P1-201ENST00000605525 367 ntBASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 AC008443.7-201ENST00000622195 246 ntBASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 AC116618.1-201ENST00000634617 774 ntBASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 AC099654.5-201ENST00000636479 350 ntBASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 AL589993.1-201ENST00000407450 2524 ntBASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 MTCO1P6-201ENST00000481192 1384 ntBASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CSB-PGBD3P0DP91 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 AP001541.1-201ENST00000623322 1904 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 RNU105B-201ENST00000364478 208 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 MIR105-2-201ENST00000385083 81 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 TAF9BP1-201ENST00000396646 746 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 HMGB1P20-201ENST00000402555 677 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 ATG4AP1-201ENST00000416893 538 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 MTATP6P27-201ENST00000416987 621 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 AC009784.1-201ENST00000426484 460 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 LARP1BP3-201ENST00000437229 869 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 AC073909.1-201ENST00000447112 999 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 AC003071.1-201ENST00000451219 789 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 MTND5P5-201ENST00000503764 376 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 AC111193.1-201ENST00000504097 155 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 DUTP7-201ENST00000507982 486 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms