Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL3A1P02461 AC107068.1-201ENST00000563286 4218 ntBASIC6.12□□□□□ -1.43
COL3A1P02461 LINC00622-201ENST00000562811 1570 ntBASIC6.12□□□□□ -1.43
COL3A1P02461 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
COL3A1P02461 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.11□□□□□ -1.43
COL3A1P02461 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL3A1P02461 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC6.11□□□□□ -1.43
COL3A1P02461 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
COL3A1P02461 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL3A1P02461 CTSL3P-202ENST00000412179 788 ntBASIC6.11□□□□□ -1.43
COL3A1P02461 AC006065.1-201ENST00000422539 802 ntBASIC6.11□□□□□ -1.43
COL3A1P02461 AP001324.1-201ENST00000428553 399 ntBASIC6.11□□□□□ -1.43
COL3A1P02461 UBE2V1P6-201ENST00000430840 422 ntBASIC6.11□□□□□ -1.43
COL3A1P02461 RPS26P4-201ENST00000431743 355 ntBASIC6.11□□□□□ -1.43
COL3A1P02461 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.11□□□□□ -1.43
COL3A1P02461 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.11□□□□□ -1.43
COL3A1P02461 FTH1P16-201ENST00000435241 552 ntBASIC6.11□□□□□ -1.43
COL3A1P02461 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC6.11□□□□□ -1.43
COL3A1P02461 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.11□□□□□ -1.43
COL3A1P02461 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC6.11□□□□□ -1.43
COL3A1P02461 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC6.11□□□□□ -1.43
COL3A1P02461 RPL7AP52-201ENST00000458096 790 ntBASIC6.11□□□□□ -1.43
COL3A1P02461 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC6.11□□□□□ -1.43
COL3A1P02461 AL139824.2-201ENST00000458731 1095 ntBASIC6.11□□□□□ -1.43
COL3A1P02461 AC005351.1-201ENST00000511152 786 ntBASIC6.11□□□□□ -1.43
COL3A1P02461 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC6.11□□□□□ -1.43
COL3A1P02461 RNA5SP303-201ENST00000516192 130 ntBASIC6.11□□□□□ -1.43
COL3A1P02461 Y_RNA.717-201ENST00000517106 92 ntBASIC6.11□□□□□ -1.43
COL3A1P02461 RAB9BP1-201ENST00000519581 626 ntBASIC6.11□□□□□ -1.43
COL3A1P02461 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC6.11□□□□□ -1.43
COL3A1P02461 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC6.11□□□□□ -1.43
COL3A1P02461 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC6.11□□□□□ -1.43
COL3A1P02461 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC6.11□□□□□ -1.43
COL3A1P02461 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC6.11□□□□□ -1.43
COL3A1P02461 AC083809.1-201ENST00000615051 472 ntBASIC6.11□□□□□ -1.43
COL3A1P02461 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL3A1P02461 OR4G3P-201ENST00000633500 913 ntBASIC6.11□□□□□ -1.43
COL3A1P02461 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL3A1P02461 AL391684.1-202ENST00000641293 1636 ntBASIC6.11□□□□□ -1.43
COL3A1P02461 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL3A1P02461 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC6.11□□□□□ -1.43
COL3A1P02461 AL356317.1-201ENST00000396110 1436 ntBASIC6.11□□□□□ -1.43
COL3A1P02461 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
COL3A1P02461 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL3A1P02461 FAP-203ENST00000443424 2598 ntTSL 2 BASIC6.11□□□□□ -1.43
COL3A1P02461 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL3A1P02461 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL3A1P02461 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC6.11□□□□□ -1.43
COL3A1P02461 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.11□□□□□ -1.43
COL3A1P02461 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL3A1P02461 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL3A1P02461 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.1□□□□□ -1.43
COL3A1P02461 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
COL3A1P02461 RNU1-83P-201ENST00000363426 164 ntBASIC6.1□□□□□ -1.43
COL3A1P02461 AC068538.1-201ENST00000376856 336 ntBASIC6.1□□□□□ -1.43
COL3A1P02461 RNU4-25P-201ENST00000410569 230 ntBASIC6.1□□□□□ -1.43
COL3A1P02461 RN7SKP167-201ENST00000411047 285 ntBASIC6.1□□□□□ -1.43
COL3A1P02461 AL365338.1-201ENST00000422282 858 ntBASIC6.1□□□□□ -1.43
COL3A1P02461 CHIAP3-201ENST00000423668 1133 ntBASIC6.1□□□□□ -1.43
COL3A1P02461 AL732292.1-201ENST00000426692 226 ntBASIC6.1□□□□□ -1.43
COL3A1P02461 BX119904.3-201ENST00000428194 957 ntBASIC6.1□□□□□ -1.43
COL3A1P02461 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.1□□□□□ -1.43
COL3A1P02461 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC6.1□□□□□ -1.43
COL3A1P02461 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC6.1□□□□□ -1.43
COL3A1P02461 RPL23AP93-201ENST00000440847 484 ntBASIC6.1□□□□□ -1.43
COL3A1P02461 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL3A1P02461 ARL2BPP10-201ENST00000446487 531 ntBASIC6.1□□□□□ -1.43
COL3A1P02461 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.1□□□□□ -1.43
COL3A1P02461 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.1□□□□□ -1.43
COL3A1P02461 AK3P4-201ENST00000504283 583 ntBASIC6.1□□□□□ -1.43
COL3A1P02461 AC016550.1-201ENST00000505348 785 ntBASIC6.1□□□□□ -1.43
COL3A1P02461 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC6.1□□□□□ -1.43
COL3A1P02461 AC034205.1-201ENST00000520621 638 ntBASIC6.1□□□□□ -1.43
COL3A1P02461 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC6.1□□□□□ -1.43
COL3A1P02461 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC6.1□□□□□ -1.43
COL3A1P02461 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.1□□□□□ -1.43
COL3A1P02461 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.1□□□□□ -1.43
COL3A1P02461 ZNF92P3-201ENST00000596594 954 ntBASIC6.1□□□□□ -1.43
COL3A1P02461 AL356490.1-201ENST00000623079 479 ntBASIC6.1□□□□□ -1.43
COL3A1P02461 AP003072.5-201ENST00000623872 773 ntBASIC6.1□□□□□ -1.43
COL3A1P02461 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.1□□□□□ -1.43
COL3A1P02461 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC6.1□□□□□ -1.43
COL3A1P02461 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
COL3A1P02461 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL3A1P02461 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC6.1□□□□□ -1.43
COL3A1P02461 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.1□□□□□ -1.43
COL3A1P02461 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL3A1P02461 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL3A1P02461 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC6.1□□□□□ -1.43
COL3A1P02461 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL3A1P02461 ZNF402P-201ENST00000404435 3100 ntBASIC6.09□□□□□ -1.43
COL3A1P02461 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL3A1P02461 RNU4-39P-201ENST00000362455 127 ntBASIC6.09□□□□□ -1.43
COL3A1P02461 RPL23AP59-201ENST00000399415 461 ntBASIC6.09□□□□□ -1.43
COL3A1P02461 AL592291.1-201ENST00000403830 352 ntBASIC6.09□□□□□ -1.43
COL3A1P02461 RNU6-584P-201ENST00000410350 95 ntBASIC6.09□□□□□ -1.43
COL3A1P02461 AC004690.1-201ENST00000418216 328 ntBASIC6.09□□□□□ -1.43
COL3A1P02461 AL139095.3-201ENST00000419672 1203 ntBASIC6.09□□□□□ -1.43
COL3A1P02461 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC6.09□□□□□ -1.43
COL3A1P02461 UBE2V2P1-201ENST00000434717 398 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms