Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RPS4XP16-201ENST00000427198 791 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 SCAND3P1-201ENST00000439854 1060 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 GEMIN8P3-201ENST00000445417 720 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AC133473.1-201ENST00000455173 299 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 HSPE1P22-201ENST00000456856 327 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 UBTFL6-201ENST00000477929 1024 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 EIF1P7-201ENST00000487533 337 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AC008897.1-201ENST00000494006 347 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AC011411.1-201ENST00000509592 876 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 VWA8P1-201ENST00000510889 176 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 GTF2F2P1-201ENST00000511083 675 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 HNRNPKP5-201ENST00000515300 253 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 BX510359.5-201ENST00000515651 304 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 RNU6-709P-201ENST00000517257 104 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AF186190.1-201ENST00000517470 480 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 IGLV3-26-201ENST00000520756 302 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 OR5M7P-201ENST00000526140 972 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 ASB8-215ENST00000540782 659 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 BLZF2P-201ENST00000553776 1130 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AC012146.2-201ENST00000576545 416 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 MIR4675-201ENST00000577898 77 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AC209154.1-201ENST00000582156 337 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AC008536.1-201ENST00000602872 669 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AC079791.1-201ENST00000605356 973 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AC010245.2-201ENST00000606908 1167 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AC019206.1-201ENST00000621938 425 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 AC068254.2-201ENST00000623938 3577 ntBASIC3.57□□□□□ -1.84
HLA-DQA1P01909 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQA1P01909 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 AL136164.3-201ENST00000624429 3978 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 CYP4Z2P-201ENST00000423332 1512 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 NXF4-202ENST00000416098 1465 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 RNA5SP335-201ENST00000363817 110 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 RNU6-819P-201ENST00000364116 107 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 RNU6-1251P-201ENST00000364502 107 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 RNU6-152P-201ENST00000384037 107 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 HMGB3P7-201ENST00000400214 611 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 NUDT19P3-201ENST00000404698 555 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 OR3A2-201ENST00000408891 1076 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 OR51A6P-201ENST00000418680 1004 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 CYCSP12-201ENST00000437729 300 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 AL354714.3-201ENST00000447284 493 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 AL157884.3-201ENST00000448273 1184 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 AL133445.1-201ENST00000467051 452 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 OR2AO1P-201ENST00000476497 403 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 RPL7P39-201ENST00000481157 744 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 PPM1AP1-201ENST00000502740 1135 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 RPL7L1P4-201ENST00000513004 707 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 RNA5SP373-201ENST00000517271 95 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 AC067904.2-201ENST00000517322 1283 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms