Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.64□□□□□ -1.51
CNOT4O95628 WBP1LP4-201ENST00000505043 344 ntBASIC5.64□□□□□ -1.51
CNOT4O95628 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.64□□□□□ -1.51
CNOT4O95628 RPL37P25-201ENST00000507308 276 ntBASIC5.64□□□□□ -1.51
CNOT4O95628 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.64□□□□□ -1.51
CNOT4O95628 AC008837.2-201ENST00000513076 418 ntBASIC5.64□□□□□ -1.51
CNOT4O95628 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.64□□□□□ -1.51
CNOT4O95628 PRELID3BP4-201ENST00000515476 571 ntBASIC5.64□□□□□ -1.51
CNOT4O95628 RNA5SP228-201ENST00000516232 133 ntBASIC5.64□□□□□ -1.51
CNOT4O95628 COX6B1P4-201ENST00000519826 484 ntBASIC5.64□□□□□ -1.51
CNOT4O95628 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.64□□□□□ -1.51
CNOT4O95628 AP003392.2-201ENST00000527269 208 ntBASIC5.64□□□□□ -1.51
CNOT4O95628 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.64□□□□□ -1.51
CNOT4O95628 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.64□□□□□ -1.51
CNOT4O95628 POLR2KP1-201ENST00000553226 168 ntBASIC5.64□□□□□ -1.51
CNOT4O95628 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.64□□□□□ -1.51
CNOT4O95628 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CNOT4O95628 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.64□□□□□ -1.51
CNOT4O95628 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.64□□□□□ -1.51
CNOT4O95628 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.64□□□□□ -1.51
CNOT4O95628 AC002519.2-203ENST00000567043 837 ntBASIC5.64□□□□□ -1.51
CNOT4O95628 AC012414.6-201ENST00000568241 401 ntBASIC5.64□□□□□ -1.51
CNOT4O95628 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC5.64□□□□□ -1.51
CNOT4O95628 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.64□□□□□ -1.51
CNOT4O95628 SLC25A36P1-201ENST00000590111 465 ntBASIC5.64□□□□□ -1.51
CNOT4O95628 BNIP3P26-201ENST00000600827 554 ntBASIC5.64□□□□□ -1.51
CNOT4O95628 AL138895.2-201ENST00000603019 178 ntBASIC5.64□□□□□ -1.51
CNOT4O95628 AC009237.13-201ENST00000603193 276 ntBASIC5.64□□□□□ -1.51
CNOT4O95628 AC025594.3-201ENST00000613068 790 ntBASIC5.64□□□□□ -1.51
CNOT4O95628 AC013476.2-201ENST00000614456 459 ntBASIC5.64□□□□□ -1.51
CNOT4O95628 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.64□□□□□ -1.51
CNOT4O95628 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.64□□□□□ -1.51
CNOT4O95628 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.64□□□□□ -1.51
CNOT4O95628 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.64□□□□□ -1.51
CNOT4O95628 SEPT14P19-203ENST00000633205 211 ntBASIC5.64□□□□□ -1.51
CNOT4O95628 AC099654.12-201ENST00000639868 649 ntBASIC5.64□□□□□ -1.51
CNOT4O95628 MFSD8-245ENST00000641743 948 ntBASIC5.64□□□□□ -1.51
CNOT4O95628 AC079753.1-201ENST00000623243 3868 ntBASIC5.64□□□□□ -1.51
CNOT4O95628 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CNOT4O95628 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CNOT4O95628 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CNOT4O95628 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.64□□□□□ -1.51
CNOT4O95628 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CNOT4O95628 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CNOT4O95628 AL136984.1-201ENST00000607611 1893 ntBASIC5.64□□□□□ -1.51
CNOT4O95628 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.64□□□□□ -1.51
CNOT4O95628 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CNOT4O95628 AL592429.1-201ENST00000403909 1473 ntBASIC5.64□□□□□ -1.51
CNOT4O95628 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CNOT4O95628 STX3-208ENST00000641815 3236 ntBASIC5.63□□□□□ -1.51
CNOT4O95628 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CNOT4O95628 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.63□□□□□ -1.51
CNOT4O95628 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CNOT4O95628 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CNOT4O95628 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
CNOT4O95628 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CNOT4O95628 IGKV7-3-201ENST00000357453 298 ntBASIC5.63□□□□□ -1.51
CNOT4O95628 RNU6-500P-201ENST00000362349 107 ntBASIC5.63□□□□□ -1.51
CNOT4O95628 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.63□□□□□ -1.51
CNOT4O95628 MIR188-201ENST00000385034 86 ntBASIC5.63□□□□□ -1.51
CNOT4O95628 AC093719.1-202ENST00000392735 373 ntBASIC5.63□□□□□ -1.51
CNOT4O95628 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.63□□□□□ -1.51
CNOT4O95628 MIR548F1-201ENST00000408667 84 ntBASIC5.63□□□□□ -1.51
CNOT4O95628 RNU2-66P-201ENST00000410650 161 ntBASIC5.63□□□□□ -1.51
CNOT4O95628 TPMTP3-201ENST00000411928 735 ntBASIC5.63□□□□□ -1.51
CNOT4O95628 VTA1P1-201ENST00000414044 866 ntBASIC5.63□□□□□ -1.51
CNOT4O95628 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.63□□□□□ -1.51
CNOT4O95628 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.63□□□□□ -1.51
CNOT4O95628 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.63□□□□□ -1.51
CNOT4O95628 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.63□□□□□ -1.51
CNOT4O95628 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.63□□□□□ -1.51
CNOT4O95628 FTH1P16-201ENST00000435241 552 ntBASIC5.63□□□□□ -1.51
CNOT4O95628 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.63□□□□□ -1.51
CNOT4O95628 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.63□□□□□ -1.51
CNOT4O95628 UBE2V1P7-201ENST00000446395 340 ntBASIC5.63□□□□□ -1.51
CNOT4O95628 ZNF619P1-201ENST00000446539 752 ntBASIC5.63□□□□□ -1.51
CNOT4O95628 VN1R34P-201ENST00000447387 883 ntBASIC5.63□□□□□ -1.51
CNOT4O95628 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CNOT4O95628 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.63□□□□□ -1.51
CNOT4O95628 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.63□□□□□ -1.51
CNOT4O95628 RN7SL326P-201ENST00000477493 296 ntBASIC5.63□□□□□ -1.51
CNOT4O95628 RPL12P31-201ENST00000478433 450 ntBASIC5.63□□□□□ -1.51
CNOT4O95628 AC096751.1-202ENST00000502691 1067 ntBASIC5.63□□□□□ -1.51
CNOT4O95628 AC147055.4-201ENST00000504399 745 ntBASIC5.63□□□□□ -1.51
CNOT4O95628 MTND2P33-201ENST00000506452 1031 ntBASIC5.63□□□□□ -1.51
CNOT4O95628 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.63□□□□□ -1.51
CNOT4O95628 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.63□□□□□ -1.51
CNOT4O95628 HSPE1P23-201ENST00000509838 286 ntBASIC5.63□□□□□ -1.51
CNOT4O95628 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.63□□□□□ -1.51
CNOT4O95628 IGLVIV-64-201ENST00000518581 301 ntBASIC5.63□□□□□ -1.51
CNOT4O95628 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CNOT4O95628 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.63□□□□□ -1.51
CNOT4O95628 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.63□□□□□ -1.51
CNOT4O95628 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.63□□□□□ -1.51
CNOT4O95628 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.63□□□□□ -1.51
CNOT4O95628 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.63□□□□□ -1.51
CNOT4O95628 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.63□□□□□ -1.51
CNOT4O95628 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.63□□□□□ -1.51
CNOT4O95628 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.63□□□□□ -1.51
CNOT4O95628 RPS3AP4-201ENST00000555161 764 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms