Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SSX4O60224 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
SSX4O60224 AC021242.1-201ENST00000507315 2035 ntBASIC4.75□□□□□ -1.65
SSX4O60224 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SSX4O60224 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SSX4O60224 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SSX4O60224 HSPD1P11-201ENST00000508643 1702 ntBASIC4.75□□□□□ -1.65
SSX4O60224 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SSX4O60224 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSX4O60224 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSX4O60224 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSX4O60224 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSX4O60224 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSX4O60224 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SSX4O60224 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SSX4O60224 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SSX4O60224 RNU4-44P-201ENST00000363050 141 ntBASIC4.74□□□□□ -1.65
SSX4O60224 RNA5SP507-201ENST00000363603 121 ntBASIC4.74□□□□□ -1.65
SSX4O60224 SNORD56.4-201ENST00000363883 71 ntBASIC4.74□□□□□ -1.65
SSX4O60224 MIR551A-201ENST00000385042 96 ntBASIC4.74□□□□□ -1.65
SSX4O60224 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SSX4O60224 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SSX4O60224 AL133325.1-201ENST00000421090 382 ntBASIC4.74□□□□□ -1.65
SSX4O60224 RIMKLBP2-201ENST00000424737 654 ntBASIC4.74□□□□□ -1.65
SSX4O60224 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SSX4O60224 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.74□□□□□ -1.65
SSX4O60224 AL645931.1-201ENST00000439737 410 ntBASIC4.74□□□□□ -1.65
SSX4O60224 EEF1B2P5-201ENST00000444820 548 ntBASIC4.74□□□□□ -1.65
SSX4O60224 IGBP1P3-201ENST00000447449 1000 ntBASIC4.74□□□□□ -1.65
SSX4O60224 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SSX4O60224 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SSX4O60224 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.74□□□□□ -1.65
SSX4O60224 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.74□□□□□ -1.65
SSX4O60224 FCF1P6-201ENST00000456841 595 ntBASIC4.74□□□□□ -1.65
SSX4O60224 PSAT1P4-201ENST00000466500 526 ntBASIC4.74□□□□□ -1.65
SSX4O60224 AC005532.2-201ENST00000467154 373 ntBASIC4.74□□□□□ -1.65
SSX4O60224 RN7SL346P-201ENST00000491561 294 ntBASIC4.74□□□□□ -1.65
SSX4O60224 RPL15P21-201ENST00000495592 567 ntBASIC4.74□□□□□ -1.65
SSX4O60224 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.74□□□□□ -1.65
SSX4O60224 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.74□□□□□ -1.65
SSX4O60224 SCARNA20.4-201ENST00000516969 131 ntBASIC4.74□□□□□ -1.65
SSX4O60224 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.74□□□□□ -1.65
SSX4O60224 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.74□□□□□ -1.65
SSX4O60224 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.74□□□□□ -1.65
SSX4O60224 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.74□□□□□ -1.65
SSX4O60224 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.74□□□□□ -1.65
SSX4O60224 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.74□□□□□ -1.65
SSX4O60224 HSPE1P2-201ENST00000554777 306 ntBASIC4.74□□□□□ -1.65
SSX4O60224 NPM1P47-201ENST00000560843 856 ntBASIC4.74□□□□□ -1.65
SSX4O60224 AC084759.1-201ENST00000561168 290 ntBASIC4.74□□□□□ -1.65
SSX4O60224 AGGF1P9-201ENST00000561884 913 ntBASIC4.74□□□□□ -1.65
SSX4O60224 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.74□□□□□ -1.65
SSX4O60224 AC022884.2-201ENST00000578535 580 ntBASIC4.74□□□□□ -1.65
SSX4O60224 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.74□□□□□ -1.65
SSX4O60224 AC233702.9-201ENST00000581528 203 ntBASIC4.74□□□□□ -1.65
SSX4O60224 AC090525.3-201ENST00000605601 189 ntBASIC4.74□□□□□ -1.65
SSX4O60224 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.74□□□□□ -1.65
SSX4O60224 MIR7155-201ENST00000615925 56 ntBASIC4.74□□□□□ -1.65
SSX4O60224 AP001005.3-201ENST00000622049 129 ntBASIC4.74□□□□□ -1.65
SSX4O60224 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SSX4O60224 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
SSX4O60224 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SSX4O60224 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SSX4O60224 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
SSX4O60224 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSX4O60224 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SSX4O60224 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.74□□□□□ -1.65
SSX4O60224 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSX4O60224 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SSX4O60224 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
SSX4O60224 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSX4O60224 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.73□□□□□ -1.65
SSX4O60224 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSX4O60224 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSX4O60224 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.73□□□□□ -1.65
SSX4O60224 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSX4O60224 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SSX4O60224 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.73□□□□□ -1.65
SSX4O60224 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
SSX4O60224 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSX4O60224 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.73□□□□□ -1.65
SSX4O60224 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSX4O60224 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSX4O60224 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SSX4O60224 RNU6-225P-201ENST00000384613 103 ntBASIC4.73□□□□□ -1.65
SSX4O60224 AC013442.1-201ENST00000397347 228 ntBASIC4.73□□□□□ -1.65
SSX4O60224 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
SSX4O60224 AL024507.1-201ENST00000412741 274 ntBASIC4.73□□□□□ -1.65
SSX4O60224 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.73□□□□□ -1.65
SSX4O60224 RPL36AP10-201ENST00000421785 322 ntBASIC4.73□□□□□ -1.65
SSX4O60224 AC013262.1-201ENST00000426710 252 ntBASIC4.73□□□□□ -1.65
SSX4O60224 FO393414.1-201ENST00000428697 1184 ntBASIC4.73□□□□□ -1.65
SSX4O60224 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.73□□□□□ -1.65
SSX4O60224 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.73□□□□□ -1.65
SSX4O60224 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.73□□□□□ -1.65
SSX4O60224 CNOT7P2-201ENST00000441051 832 ntBASIC4.73□□□□□ -1.65
SSX4O60224 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.73□□□□□ -1.65
SSX4O60224 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.73□□□□□ -1.65
SSX4O60224 BTF3P6-201ENST00000448054 499 ntBASIC4.73□□□□□ -1.65
SSX4O60224 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms