Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC027228.2-201ENST00000567141 2154 ntBASIC5.52□□□□□ -1.53
TRIM38O00635 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM38O00635 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
TRIM38O00635 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TRIM38O00635 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM38O00635 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM38O00635 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM38O00635 RNU4-2-201ENST00000365668 141 ntBASIC5.52□□□□□ -1.53
TRIM38O00635 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM38O00635 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM38O00635 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM38O00635 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM38O00635 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM38O00635 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM38O00635 RPS24P8-201ENST00000431490 402 ntBASIC5.52□□□□□ -1.53
TRIM38O00635 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM38O00635 LINC02210-201ENST00000444561 288 ntBASIC5.52□□□□□ -1.53
TRIM38O00635 RPL31P44-201ENST00000447680 377 ntBASIC5.52□□□□□ -1.53
TRIM38O00635 VDAC2P4-201ENST00000452925 711 ntBASIC5.52□□□□□ -1.53
TRIM38O00635 MEMO1P4-201ENST00000453590 386 ntBASIC5.52□□□□□ -1.53
TRIM38O00635 HMGB1P4-201ENST00000455362 567 ntBASIC5.52□□□□□ -1.53
TRIM38O00635 AC104164.3-201ENST00000467363 1258 ntBASIC5.52□□□□□ -1.53
TRIM38O00635 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM38O00635 RPS17P5-201ENST00000498293 408 ntBASIC5.52□□□□□ -1.53
TRIM38O00635 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.52□□□□□ -1.53
TRIM38O00635 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM38O00635 PGAM1P13-201ENST00000507497 754 ntBASIC5.52□□□□□ -1.53
TRIM38O00635 AC105384.2-201ENST00000508433 640 ntBASIC5.52□□□□□ -1.53
TRIM38O00635 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM38O00635 RNA5SP230-201ENST00000517039 122 ntBASIC5.52□□□□□ -1.53
TRIM38O00635 SEPT10P1-201ENST00000517342 1162 ntBASIC5.52□□□□□ -1.53
TRIM38O00635 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM38O00635 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM38O00635 AC021451.1-201ENST00000523498 1129 ntBASIC5.52□□□□□ -1.53
TRIM38O00635 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM38O00635 HAUS8P1-201ENST00000549005 542 ntBASIC5.52□□□□□ -1.53
TRIM38O00635 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM38O00635 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM38O00635 AC090607.5-201ENST00000615692 224 ntBASIC5.52□□□□□ -1.53
TRIM38O00635 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM38O00635 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM38O00635 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM38O00635 AC092376.2-201ENST00000622621 4116 ntBASIC5.52□□□□□ -1.53
TRIM38O00635 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM38O00635 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM38O00635 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM38O00635 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM38O00635 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM38O00635 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM38O00635 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM38O00635 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
TRIM38O00635 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
TRIM38O00635 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM38O00635 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM38O00635 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM38O00635 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM38O00635 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM38O00635 IGKV7-3-201ENST00000357453 298 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM38O00635 RNU6-236P-201ENST00000363886 106 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TRIM38O00635 U6.112-201ENST00000384129 70 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 RNU6-98P-201ENST00000384173 107 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TRIM38O00635 RNU1-77P-201ENST00000390868 162 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 AL035419.1-201ENST00000397037 564 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 RPS6P23-201ENST00000413224 722 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM38O00635 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM38O00635 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM38O00635 HMGN2P27-201ENST00000427352 270 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.51□□□□□ -1.53
TRIM38O00635 VN1R108P-201ENST00000431580 830 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.51□□□□□ -1.53
TRIM38O00635 AC073143.1-201ENST00000436316 395 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 AC006335.2-201ENST00000437993 330 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 ELOCP13-201ENST00000443934 329 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 ARL5AP2-201ENST00000444698 533 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 CASP3P1-201ENST00000446037 609 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM38O00635 OTX2P1-201ENST00000450956 354 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.51□□□□□ -1.53
TRIM38O00635 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM38O00635 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM38O00635 RPS4XP6-201ENST00000477670 797 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 AC079841.1-201ENST00000481228 950 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 PRELID3BP5-201ENST00000508612 460 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM38O00635 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM38O00635 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
TRIM38O00635 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.51□□□□□ -1.53
TRIM38O00635 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM38O00635 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM38O00635 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
TRIM38O00635 AC137627.1-201ENST00000545761 289 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 POLR2KP1-201ENST00000553226 168 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 NPM1P47-201ENST00000560843 856 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 SULT1C2P2-201ENST00000562517 294 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms