Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AC024341.1-201ENST00000526444 1552 ntBASIC4.88□□□□□ -1.63
RTCAO00442 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RTCAO00442 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RTCAO00442 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.88□□□□□ -1.63
RTCAO00442 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.88□□□□□ -1.63
RTCAO00442 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RTCAO00442 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RTCAO00442 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.88□□□□□ -1.63
RTCAO00442 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.88□□□□□ -1.63
RTCAO00442 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RTCAO00442 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RTCAO00442 SNORA17.1-201ENST00000362945 126 ntBASIC4.88□□□□□ -1.63
RTCAO00442 RNU1-87P-201ENST00000363727 170 ntBASIC4.88□□□□□ -1.63
RTCAO00442 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RTCAO00442 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RTCAO00442 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
RTCAO00442 NUDT19P3-201ENST00000404698 555 ntBASIC4.88□□□□□ -1.63
RTCAO00442 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.88□□□□□ -1.63
RTCAO00442 GTF3AP1-201ENST00000416942 1004 ntBASIC4.88□□□□□ -1.63
RTCAO00442 AL355433.1-201ENST00000422804 300 ntBASIC4.88□□□□□ -1.63
RTCAO00442 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.88□□□□□ -1.63
RTCAO00442 AC009238.2-201ENST00000431026 355 ntBASIC4.88□□□□□ -1.63
RTCAO00442 ZFAND6P1-201ENST00000434138 605 ntBASIC4.88□□□□□ -1.63
RTCAO00442 CEACAMP1-201ENST00000434624 1035 ntBASIC4.88□□□□□ -1.63
RTCAO00442 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.88□□□□□ -1.63
RTCAO00442 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.88□□□□□ -1.63
RTCAO00442 MTND2P8-201ENST00000450555 1025 ntBASIC4.88□□□□□ -1.63
RTCAO00442 HMGB1P5-202ENST00000451497 985 ntBASIC4.88□□□□□ -1.63
RTCAO00442 AC092647.2-201ENST00000452998 253 ntBASIC4.88□□□□□ -1.63
RTCAO00442 RN7SL222P-201ENST00000476452 299 ntBASIC4.88□□□□□ -1.63
RTCAO00442 AC079841.1-201ENST00000481228 950 ntBASIC4.88□□□□□ -1.63
RTCAO00442 RN7SL30P-201ENST00000488416 306 ntBASIC4.88□□□□□ -1.63
RTCAO00442 AL049874.2-201ENST00000492636 288 ntBASIC4.88□□□□□ -1.63
RTCAO00442 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.88□□□□□ -1.63
RTCAO00442 AC008953.1-201ENST00000497334 318 ntBASIC4.88□□□□□ -1.63
RTCAO00442 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
RTCAO00442 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.88□□□□□ -1.63
RTCAO00442 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.88□□□□□ -1.63
RTCAO00442 RNA5SP360-201ENST00000516555 118 ntBASIC4.88□□□□□ -1.63
RTCAO00442 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
RTCAO00442 AP002812.4-201ENST00000532139 286 ntBASIC4.88□□□□□ -1.63
RTCAO00442 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.88□□□□□ -1.63
RTCAO00442 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.88□□□□□ -1.63
RTCAO00442 AC011477.5-201ENST00000586571 259 ntBASIC4.88□□□□□ -1.63
RTCAO00442 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
RTCAO00442 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.88□□□□□ -1.63
RTCAO00442 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.88□□□□□ -1.63
RTCAO00442 AC095055.1-201ENST00000603472 1113 ntBASIC4.88□□□□□ -1.63
RTCAO00442 AC115621.1-201ENST00000604653 858 ntBASIC4.88□□□□□ -1.63
RTCAO00442 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.88□□□□□ -1.63
RTCAO00442 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.88□□□□□ -1.63
RTCAO00442 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.88□□□□□ -1.63
RTCAO00442 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.88□□□□□ -1.63
RTCAO00442 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.88□□□□□ -1.63
RTCAO00442 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RTCAO00442 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RTCAO00442 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.88□□□□□ -1.63
RTCAO00442 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
RTCAO00442 MTND4P31-201ENST00000425607 1343 ntBASIC4.88□□□□□ -1.63
RTCAO00442 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
RTCAO00442 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RTCAO00442 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RTCAO00442 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RTCAO00442 AC015813.6-201ENST00000624409 5808 ntBASIC4.87□□□□□ -1.63
RTCAO00442 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RTCAO00442 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RTCAO00442 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RTCAO00442 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RTCAO00442 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.87□□□□□ -1.63
RTCAO00442 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RTCAO00442 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RTCAO00442 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.87□□□□□ -1.63
RTCAO00442 Z95331.1-201ENST00000623075 23112 ntBASIC4.87□□□□□ -1.63
RTCAO00442 U3.32-201ENST00000408116 212 ntBASIC4.87□□□□□ -1.63
RTCAO00442 AL450992.3-201ENST00000413192 568 ntBASIC4.87□□□□□ -1.63
RTCAO00442 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.87□□□□□ -1.63
RTCAO00442 BX323845.1-201ENST00000432417 179 ntBASIC4.87□□□□□ -1.63
RTCAO00442 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.87□□□□□ -1.63
RTCAO00442 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.87□□□□□ -1.63
RTCAO00442 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.87□□□□□ -1.63
RTCAO00442 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.87□□□□□ -1.63
RTCAO00442 MTCO3P43-201ENST00000440974 771 ntBASIC4.87□□□□□ -1.63
RTCAO00442 CNOT7P2-201ENST00000441051 832 ntBASIC4.87□□□□□ -1.63
RTCAO00442 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.87□□□□□ -1.63
RTCAO00442 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RTCAO00442 AL389915.2-201ENST00000454576 441 ntBASIC4.87□□□□□ -1.63
RTCAO00442 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.87□□□□□ -1.63
RTCAO00442 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RTCAO00442 AC116562.1-201ENST00000485355 781 ntBASIC4.87□□□□□ -1.63
RTCAO00442 AC107398.1-201ENST00000486904 505 ntBASIC4.87□□□□□ -1.63
RTCAO00442 RN7SL214P-201ENST00000487317 265 ntBASIC4.87□□□□□ -1.63
RTCAO00442 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.87□□□□□ -1.63
RTCAO00442 RNA5SP92-201ENST00000516437 110 ntBASIC4.87□□□□□ -1.63
RTCAO00442 RNU6-467P-201ENST00000517027 110 ntBASIC4.87□□□□□ -1.63
RTCAO00442 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.87□□□□□ -1.63
RTCAO00442 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.87□□□□□ -1.63
RTCAO00442 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.87□□□□□ -1.63
RTCAO00442 OR8K2P-201ENST00000524645 927 ntBASIC4.87□□□□□ -1.63
RTCAO00442 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.87□□□□□ -1.63
RTCAO00442 DYNLL1P4-201ENST00000549314 266 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms