Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.7□□□□□ -1.66
PDLIM1O00151 OR7E10P-201ENST00000526420 991 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.7□□□□□ -1.66
PDLIM1O00151 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.7□□□□□ -1.66
PDLIM1O00151 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.7□□□□□ -1.66
PDLIM1O00151 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM1O00151 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PDLIM1O00151 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.7□□□□□ -1.66
PDLIM1O00151 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM1O00151 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.7□□□□□ -1.66
PDLIM1O00151 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.7□□□□□ -1.66
PDLIM1O00151 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.7□□□□□ -1.66
PDLIM1O00151 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.7□□□□□ -1.66
PDLIM1O00151 MIR1269B-201ENST00000580405 75 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.7□□□□□ -1.66
PDLIM1O00151 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
PDLIM1O00151 AC069307.1-201ENST00000602820 447 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.7□□□□□ -1.66
PDLIM1O00151 AC234782.5-201ENST00000617723 324 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM1O00151 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PDLIM1O00151 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM1O00151 AC107068.1-201ENST00000563286 4218 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 RARSP1-201ENST00000542842 1418 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 AP000542.2-201ENST00000623199 6179 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 CASC19-206ENST00000641028 1430 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 EOGT-210ENST00000615922 1931 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 OR11H5P-202ENST00000641612 1325 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM1O00151 AL031985.3-201ENST00000565390 2449 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM1O00151 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PDLIM1O00151 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM1O00151 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM1O00151 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM1O00151 HSPA8P17-201ENST00000427029 1382 ntBASIC4.69□□□□□ -1.66
PDLIM1O00151 AC092747.4-201ENST00000620519 1861 ntBASIC4.69□□□□□ -1.66
PDLIM1O00151 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM1O00151 AL590763.1-201ENST00000398297 1545 ntBASIC4.69□□□□□ -1.66
PDLIM1O00151 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM1O00151 AC010132.2-201ENST00000295493 1043 ntBASIC4.69□□□□□ -1.66
PDLIM1O00151 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM1O00151 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM1O00151 RNU6-178P-201ENST00000384631 104 ntBASIC4.69□□□□□ -1.66
PDLIM1O00151 AP000534.2-201ENST00000412729 568 ntBASIC4.69□□□□□ -1.66
PDLIM1O00151 VDAC1P9-201ENST00000412766 841 ntBASIC4.69□□□□□ -1.66
PDLIM1O00151 QRSL1P2-201ENST00000418582 964 ntBASIC4.69□□□□□ -1.66
PDLIM1O00151 PPIAP13-201ENST00000434706 478 ntBASIC4.69□□□□□ -1.66
PDLIM1O00151 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.69□□□□□ -1.66
PDLIM1O00151 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.69□□□□□ -1.66
PDLIM1O00151 RPL7P28-201ENST00000437739 740 ntBASIC4.69□□□□□ -1.66
PDLIM1O00151 RPS29P10-201ENST00000439197 166 ntBASIC4.69□□□□□ -1.66
PDLIM1O00151 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM1O00151 TXNP5-201ENST00000441043 315 ntBASIC4.69□□□□□ -1.66
PDLIM1O00151 AC245047.2-201ENST00000441060 530 ntBASIC4.69□□□□□ -1.66
PDLIM1O00151 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM1O00151 AL691482.1-201ENST00000453255 87 ntBASIC4.69□□□□□ -1.66
PDLIM1O00151 AL133244.1-201ENST00000456007 258 ntBASIC4.69□□□□□ -1.66
PDLIM1O00151 PRELID3BP7-201ENST00000503606 469 ntBASIC4.69□□□□□ -1.66
PDLIM1O00151 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.69□□□□□ -1.66
PDLIM1O00151 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.69□□□□□ -1.66
PDLIM1O00151 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM1O00151 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM1O00151 AC008147.3-201ENST00000548666 354 ntBASIC4.69□□□□□ -1.66
PDLIM1O00151 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM1O00151 CD24P2-201ENST00000565486 219 ntBASIC4.69□□□□□ -1.66
PDLIM1O00151 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.69□□□□□ -1.66
PDLIM1O00151 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM1O00151 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM1O00151 BX322635.1-201ENST00000605804 496 ntBASIC4.69□□□□□ -1.66
PDLIM1O00151 AP005432.2-201ENST00000608162 586 ntBASIC4.69□□□□□ -1.66
PDLIM1O00151 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.69□□□□□ -1.66
PDLIM1O00151 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PDLIM1O00151 AC104820.1-201ENST00000624183 307 ntBASIC4.69□□□□□ -1.66
PDLIM1O00151 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.69□□□□□ -1.66
PDLIM1O00151 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.69□□□□□ -1.66
PDLIM1O00151 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.69□□□□□ -1.66
PDLIM1O00151 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.69□□□□□ -1.66
PDLIM1O00151 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM1O00151 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
PDLIM1O00151 DDX18P5-201ENST00000534547 1306 ntBASIC4.69□□□□□ -1.66
PDLIM1O00151 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM1O00151 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM1O00151 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM1O00151 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.68□□□□□ -1.66
PDLIM1O00151 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.68□□□□□ -1.66
PDLIM1O00151 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM1O00151 AC008549.2-201ENST00000333482 706 ntBASIC4.68□□□□□ -1.66
PDLIM1O00151 SNORD74.4-201ENST00000364129 80 ntBASIC4.68□□□□□ -1.66
PDLIM1O00151 MIR1178-201ENST00000408396 91 ntBASIC4.68□□□□□ -1.66
PDLIM1O00151 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.68□□□□□ -1.66
PDLIM1O00151 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.68□□□□□ -1.66
PDLIM1O00151 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.68□□□□□ -1.66
PDLIM1O00151 EIF4HP2-201ENST00000424380 563 ntBASIC4.68□□□□□ -1.66
PDLIM1O00151 MTCO1P57-201ENST00000432182 261 ntBASIC4.68□□□□□ -1.66
PDLIM1O00151 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.68□□□□□ -1.66
PDLIM1O00151 AC073052.1-201ENST00000440417 714 ntBASIC4.68□□□□□ -1.66
PDLIM1O00151 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.68□□□□□ -1.66
PDLIM1O00151 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms