Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RNU4-5P-201ENST00000607255 135 ntBASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 AC079395.2-201ENST00000610982 737 ntBASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 AC015914.2-201ENST00000618167 288 ntBASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 MIR6861-201ENST00000618657 64 ntBASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 AC104985.3-201ENST00000623479 597 ntBASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 RPS27AP11-201ENST00000402798 447 ntBASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 SNORA77-201ENST00000408716 125 ntBASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 OSTCP5-201ENST00000425293 453 ntBASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 CFL1P1-202ENST00000432948 411 ntBASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 YWHAZP2-201ENST00000440317 728 ntBASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 GTF3AP5-201ENST00000442645 697 ntBASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 RBMY2TP-201ENST00000451162 947 ntBASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 AC011225.1-201ENST00000457751 369 ntBASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 PRELID3BP5-201ENST00000508612 460 ntBASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 RN7SKP287-201ENST00000516546 266 ntBASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 RPL23AP53-201ENST00000521854 457 ntBASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 AC012339.2-201ENST00000523996 453 ntBASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 AC027026.1-201ENST00000532323 742 ntBASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 MTCYBP23-201ENST00000558717 1102 ntBASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 ZNF971P-201ENST00000562068 1249 ntBASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 AC009852.2-201ENST00000567898 485 ntBASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 AC027455.1-201ENST00000574104 594 ntBASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 AL450336.1-201ENST00000605180 586 ntBASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 AC106052.1-201ENST00000608029 497 ntBASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TCRBV7S3A2A0A539 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 AC017079.1-201ENST00000333650 415 ntBASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 RNU1-43P-201ENST00000365052 165 ntBASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 U6.112-201ENST00000384129 70 ntBASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 RNU6-729P-201ENST00000384399 107 ntBASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 LRRC37BP1-201ENST00000398851 714 ntBASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 RN7SKP114-201ENST00000410327 279 ntBASIC5.13□□□□□ -1.59
TCRBV7S3A2A0A539 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms