Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AC068287.1-201ENST00000430283 295 ntBASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AL353597.2-202ENST00000434901 373 ntBASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 RPL34P20-201ENST00000442771 351 ntBASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AC092691.2-201ENST00000461787 803 ntBASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AC063943.1-201ENST00000465434 453 ntBASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AC068587.1-201ENST00000483613 781 ntBASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 RPS27AP16-201ENST00000492222 470 ntBASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 HPRT1P1-201ENST00000509498 657 ntBASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AC091912.1-201ENST00000511351 248 ntBASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AC108471.1-201ENST00000513977 287 ntBASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AC022360.1-201ENST00000521058 340 ntBASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AC087272.1-201ENST00000523624 533 ntBASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 OR4A43P-201ENST00000532938 908 ntBASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AC068714.1-201ENST00000559623 800 ntBASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AL731537.2-201ENST00000561565 951 ntBASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AC021483.2-201ENST00000567415 758 ntBASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AC209154.1-201ENST00000582156 337 ntBASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 MIR5096-201ENST00000583713 70 ntBASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AC068790.4-201ENST00000602474 263 ntBASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AP001521.2-201ENST00000608772 546 ntBASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AL096803.3-201ENST00000609032 532 ntBASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AL162233.1-201ENST00000620014 944 ntBASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AC007342.8-201ENST00000623278 678 ntBASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AC079298.2-201ENST00000623885 459 ntBASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PCDHGA1Q9Y5H4 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
PCDHGA1Q9Y5H4 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.96□□□□□ -1.61
PCDHGA1Q9Y5H4 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
PCDHGA1Q9Y5H4 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.96□□□□□ -1.61
PCDHGA1Q9Y5H4 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.96□□□□□ -1.61
PCDHGA1Q9Y5H4 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
PCDHGA1Q9Y5H4 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 AC021242.1-201ENST00000507315 2035 ntBASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 AC090971.4-201ENST00000560291 1800 ntBASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 AC092681.1-201ENST00000297369 291 ntBASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 RPS3AP23-201ENST00000401762 784 ntBASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 SNORA11-201ENST00000408789 128 ntBASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 AC079809.1-201ENST00000415468 276 ntBASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 AC022133.1-201ENST00000490961 571 ntBASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 OR9N1P-202ENST00000494289 481 ntBASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 RPS24P16-201ENST00000497294 392 ntBASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.96□□□□□ -1.62
PCDHGA1Q9Y5H4 AL359219.2-201ENST00000555184 348 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms