Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AC090246.1-201ENST00000616499 426 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 RNA5SP439-201ENST00000617595 124 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 MIR6826-201ENST00000617808 98 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AL137067.2-201ENST00000621202 131 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 ADAM24P-201ENST00000398655 2101 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 YES1P1-201ENST00000418510 1628 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AC022164.1-201ENST00000568767 2673 ntBASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 RPL34P3-201ENST00000421454 338 ntBASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 GTF2IP23-201ENST00000423746 351 ntBASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AC016027.5-201ENST00000427227 210 ntBASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AL365396.1-201ENST00000430854 671 ntBASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 LYPLA1P1-201ENST00000434514 622 ntBASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AP000281.1-201ENST00000444036 316 ntBASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AL512593.1-201ENST00000444758 779 ntBASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AC079776.3-201ENST00000450665 370 ntBASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 ATP5LP3-201ENST00000514223 304 ntBASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AP000859.1-201ENST00000525536 307 ntBASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AC022404.1-201ENST00000555320 273 ntBASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 MIR3189-201ENST00000578735 73 ntBASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AC025857.2-201ENST00000602711 238 ntBASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 Z94722.1-201ENST00000604328 474 ntBASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AL133507.1-201ENST00000605269 557 ntBASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AC018638.7-201ENST00000605836 1114 ntBASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AC093783.1-201ENST00000612976 329 ntBASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AL603755.1-201ENST00000619504 163 ntBASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 MIR3974-201ENST00000637126 96 ntBASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
PCDHGA3Q9Y5H0 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms